OR1P1P Olfactory Receptor
| Gene Symbol | OR1P1P1 (View this gene in GeneCards) |
| Family | 1 |
| Subfamily | P |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR17-9, OR17-208, HsOR17.1.5P, ORL492 |
| External Ids | HGNC: 8222 GeneBank: AB065608, AF087927, AF399436, AF546364-AF546371, AF546374, AF546375, BK004548, NG_002153 ORDB: ORL492 |
| Build #39 labels | OR1P1P |
| Chromosomal location | 17:3,153,893-3,154,852 (-) |
| Cluster | 17@3b |
| Synteny | CLIC#39 |
| Remarks | Segregating Pseudo Gene, a nonsynonymous SNP rs7222006 (AA change=*/A ) |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR1E1 | 55.31% | 311 |
| OR1M1 | 54.14% | 314 |
| OR1N1 | 57.52% | 306 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR1P1 | 84% | 317 |
| Mouse | Or1p1 | 83% | 314 |
| Mouse | Or1p1c | 82% | 314 |
| Mouse | Or1p1b | 82% | 290 |
| Rat | Or1p1 | 83% | 314 |
| Rat | Or1p1d | 83% | 314 |
| Rat | Or1p1e | 82% | 314 |
| Cow | OR1P1 | 82% | 317 |
| Orang | OR1P1 | 94% | 320 |
| Horse | OR1P1 | 84% | 317 |
| Chimp | OR1N1 | 57% | 306 |
Sequence information
| Nucleotide sequence |
ACCTCTGAGCTCCTGGAAGGAGGGAATCAGACTAGCACCTTTGAGTTCCTCCTCTGGGGA CTCTCAGACCAGCCACAGCAGCAACACATCTTCTTCCTGCTGTTTCTGTGGATGTACGTG GTCACTGTGGCTGGGAACCTGCTCATTGTCCTGGCCATTGGCACTGACACACACCTCCAC ACCCCTATGTACTTCTTCCTTGCCAGCTTGTCGTGTGCAGATATCTTTTCCACCTCCACC ACTGTGCCCAAGGCCCTGGTGAATATCCAGACCCAGAGCAGGTCCATTTCCTACGCAGGG TGTTTGGCACAGCTCTACTTCTTCTTGACTTTTGGGGACATGGACATCTTTCTCCCGGCT ACAATGGCCTATGACCGCTATGTGGCCATTTGCCACCTGCTCCACTATATGATGATCATG AGCCTCCACCGCTGTGCCTTCCTGGTGACAGCCTGCTGGACCCTCACAAGTCTTCTCGCC ATGACTCGCACCTTCCTCATATTCCGGCTTTCCTTGTGCTCTTAGATCCTTCCTGGCTTC TTCTGTGATTTGGGACCGCTGATGAAGGTGTCTTGCTCTGACGCCCAGGTCAATGAGCTT GTGCTCCTCTTCCTAGGGGGAGCAGTCATTTTAATCCCTTTTATGCTCATCCTGGTCTCT TATATCCGCATTGTTTCAGCCATCCTCAGGGCCCCCTCTGCCCAGGGAAGGCGCAAGGCC TTCTCTACCTGCGACTCTCACCTCGTTGTTGTTGCTTTGTTCTTTGGGACAGTGATCAGG GCTTATCTGTGCCCCTCATCCTCTTCCTCCAACTCAGTAAAGGAGGATACAGCGGCTGCT GTCATGTACACAGTGGTGACTCCCCTGCTGAACCCCTTTATTTACAGCATGCGGAACAAG GACATGAAGGCGGCGGTGGTTAGACTTCTCAAGGGCAGGGTCTCCTTCTCACAGGGCCAG |
| Conceptual translation |
TSELLEGGNQTSTFEFLLWGLSDQPQQQHIFFLLFLWMYVVTVAGNLLIVLAIGTDTHLH TPMYFFLASLSCADIFSTSTTVPKALVNIQTQSRSISYAGCLAQLYFFLTFGDMDIFLPA TMAYDRYVAICHLLHYMMIMSLHRCAFLVTACWTLTSLLAMTRTFLIFRLSLCSXLPGF FCDLGPLMKVSCSDAQVNELVLLFLGGAVILIPFMLILVSYIRIVSAILRAPSAQGRRKA FSTCDSHLVVVALFFGTVIRAYLCPSSSSSNSVKEDTAAAVMYTVVTPLLNPFIYSMRNK DMKAAVVRLLKGRVSFSQGQ Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 17 | 100 | -100 | SNP | C/G | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
| 17 | 3,057,228 | 3,057,228 | SNP | C/G | rs16952709 (DbSNP) | |
| 17 | 3,057,413 | 3,057,413 | SNP | T/C | rs1081100 (DbSNP) | |
| 17 | 3,057,511 | 3,057,511 | SNP | G/T | rs7220042 (DbSNP) | |
| 17 | 3,057,624 | 3,057,624 | rescued_nonsense | A/T | rs7222006 (DbSNP) | |
| 17 | 3,057,631 | 3,057,631 | SNP | C/G | rs7221413 (DbSNP) | |
| 17 | 3,057,790 | 3,057,790 | SNP | C/T | rs16952712 (DbSNP) | |
| 17 | 3,154,020 | 3,154,020 | SNP | G/A | 1000GP (CEU) | |
| 17 | 3,154,119 | 3,154,119 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 17 | 3,154,217 | 3,154,217 | SNP | G/T | 1000GP (CEU, CHBJPT) | |
| 17 | 3,154,330 | 3,154,330 | SNP | A/T | 1000GP (CEU, CHBJPT) | |
| 17 | 3,154,337 | 3,154,337 | SNP | C/G | 1000GP (CEU, CHBJPT) | |
| 17 | 3,154,496 | 3,154,496 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 17 | 3,154,763 | 3,154,763 | SNP | G/A | 1000GP (CEU) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 17 | 3,018,447 | 3,159,865 | CopyNumber | Variation_2217 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.