OR2A15P Olfactory Receptor
| Gene Symbol | OR2A15P1 (View this gene in GeneCards) |
| Family | 2 |
| Subfamily | A |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR7.6.14P, ORL3196 |
| External Ids | HGNC: 15085 GeneBank: NG_004290 ORDB: ORL3196 |
| Build #39 labels | OR2A28P, OR2A15P |
| Chromosomal location | 7:144,118,464-144,119,360 (-) |
| Cluster | 7@144 |
| Synteny | CLIC#16 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR2A13P | 68.95% | 306 |
| OR2A14 | 76.14% | 306 |
| OR2A5 | 73.86% | 306 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR2A37 | 77% | 308 |
| Mouse | Or2a14 | 74% | 310 |
| Rat | Or2a14 | 74% | 310 |
| Cow | OR2A5 | 75% | 310 |
| Orang | OR2A14 | 78% | 310 |
| Horse | OR2A14 | 72% | 308 |
| Chimp | OR2A14 | 77% | 309 |
Sequence information
| Nucleotide sequence |
ATGGGATGTCACCAATCAATGGTCACAGAATTCATCCTGGTGGGATTCCAGCTCAGTGCT GAGATGGAAGTGCTCCTCTTTTGGAGCTTCTCCCTTGGAATAGCCTTGGAACTCATCTGT CTGGACCACAGTCTGCACACTCTCATACTTCTTCCTCTCACACCTGGCCGTCATTGACAT GTCCTATGCTTCCAACAATGTTCCCAAGATGCTGGTGGATCTTGCGAACTAGAAAAGCAC CATGTGCTTTTTTCCATGCATAATGCAGACATTCTTGTATTTGGCTTTTGCTCACATAGA GTGTCTGATTTTGGTGGTTTTGTCCTATGATCGCTATGTGGCCATCTGCCACCCCTTACG TTACAATGTCCTCATGAGCTGGAGAGAGTGCACTGTCCTGGCTGTGGCTTCCTGGGTGTT CAGCTTCCTCCTGGCTCTGGTCCATTTAGTTCTCATTCTGAGGCTGCCCTTCAGTGGGCT CATGAAATCAACCACTACTGTGAAATCCTGTCTGTCCTCAAGTTGGCCTGTGCTGACACC TGGCTCAACCAGGTGGTCATCTTTGCAGCCTGCATGTTCATCCTGGTAGGGTCACTCTGC CTGGTGCTGGTCTCTTACTTGGGCATCCTGGCGGCCATCCTGAGGATCCAGTCTGGCGAG GGCCGCAGAAAGGCCTTCTCTACCTGCTCCTCCCACCTCTGTGTGGTGGAGTTCTTCTTT GGCAACGCCATTGTCATGTACATGGCCCCCAAGTCCCGCCATCCCGAGGAGCAGCAGAAG GTCCTTTCCCTGTTTTGCAGCCTTTGGAATCAGGTGCTGAACCCTCTGATCTACAGCTTG AGGAATGCAGAGGTCAAGAGTGCCCAGAAGAGGGCACTGAGGAAGGAGAGGCTGATG |
| Conceptual translation |
MGCHQSMVTEFILVGFQLSAEMEVLLFWSFSLGIALELICLDHSLHT\YFFLSHLAVID MSYASNNVPKMLVDLANXSTMCFFPCIMQTFLYLAFAHIECLILVVLSYDRYVAICHPL RYNVLMSWRECTVLAVASWVFSFLLALVHLVLILRLPFSG/HEINHYCEILSVLKLACA DTWLNQVVIFAACMFILVGSLCLVLVSYLGILAAILRIQSGEGRRKAFSTCSSHLCVVEF FFGNAIVMYMAPKSRHPEEQQKVLSLFCSLWNQVLNPLIYSLRNAEVKSAQKRALRKERL M Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 7 | 143,816,218 | 143,816,217 | Ins(1) | -/T | rs34690123 (DbSNP) | |
| 7 | 143,815,689 | 143,815,689 | SNP | A/G | rs28647821 (DbSNP) | |
| 7 | 143,815,861 | 143,815,861 | SNP | C/G | rs2961155 (DbSNP) | |
| 7 | 143,815,789 | 143,815,789 | SNP | C/T | rs10245844 (DbSNP) | |
| 7 | 143,816,388 | 143,816,388 | SNP | C/T | rs57185614 (DbSNP) | |
| 7 | 143,815,744 | 143,815,744 | SNP | C/T | rs10263904 (DbSNP) | |
| 7 | 143,815,780 | 143,815,780 | SNP | G/T | rs10274340 (DbSNP) | |
| 7 | 143,816,228 | 143,816,228 | SNP | T/C | rs2951294 (DbSNP) | |
| 7 | 144,118,651 | 144,118,651 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 7 | 144,118,687 | 144,118,687 | SNP | G/T | 1000GP (CEU, CHBJPT) | |
| 7 | 144,118,696 | 144,118,696 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 7 | 144,118,768 | 144,118,768 | SNP | G/C | 1000GP (CEU, CHBJPT) | |
| 7 | 144,118,864 | 144,118,864 | SNP | T/A | 1000GP (CEU, CHBJPT) | |
| 7 | 144,119,135 | 144,119,135 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 7 | 144,119,180 | 144,119,180 | SNP | C/T | 1000GP (CEU) | |
| 7 | 144,118,704 | 144,118,704 | SNP | G/C | 1000GP (CHBJPT) | |
| 7 | 100 | -100 | SNP | A/G | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 7 | 143,147,775 | 144,368,638 | CopyNumber | Variation_3708 (DGV) |
| 7 | 143,742,520 | 143,847,474 | CopyNumber | Variation_4570 (DGV) |
| 7 | 143,572,286 | 143,866,532 | CopyNumber | Variation_8581 (DGV) |
| 7 | 143,217,296 | 144,074,520 | CopyNumber | Variation_32962 (DGV) |
| 7 | 143,545,719 | 143,874,190 | CopyNumber | Variation_53583 (DGV) |
| CopyNumber | 74 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.