Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

Select ORs from

Family: Subfamily:

Chromosome:

OR2A3P Olfactory Receptor

Gene Symbol OR2A3P1 (View this gene in GeneCards)
Family 2
Subfamily A
Pseudogene Yes
CORP pseudogene probability score
Aliases OR7-14, OR7-15, AC004889-B, HsOR7.6.17P, ORL31202
External Ids HGNC: 8231   GeneBank: AB065480, AF399461, BK004422, BK004542, NG_004292   ORDB: ORL31202   
Build #39 labels OR2A3P
Chromosomal location 7:144,157,226-144,158,156 (+)
Cluster 7@144
Synteny CLIC#16
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR2A13P 75.16% 310

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR2A58 79% 310
Mouse Or2a52 72% 310
Rat Or2a52 73% 307
Cow OR2A64 74% 307
Orang OR2A3BP 94% 309
Horse OR2A72 77% 308
Chimp OR2A13 76% 310

Expression evidences

Source Accession
GNF Atlas2 gnf1h10903_at

Sequence information

Nucleotide sequence ATGGGGGACAACCAATCACGGGTCACAGAATTCATCCTGGTTGGATTCCAGCTCAGTGTG
GAGATGGAAGTGCTCCTCTTCTGGATCTTCTCCCTGTTATATCTCTTCAGCCTGCTGGCA
AATGGCATGATCTTGGGGCTCATCTGTCTGGATCCCAGACTGCGCACCCCCATGTACTTC
TTCCTGTCACACTTGGCCGTCATTGACATATACTATGCTTCCAGCAATTTGCTCAACATG
CTGGAAAACCTAGTGAAACACAAAAAAAACTATCTCGTTCATCTCTTGCATTATGCAGAT
GGCTTTGTATTTGACTTTTGCTGCTGCAGTGTGCATGATTTTGGTGGTGATGTCCTATGA
CAGATTTGTGGCGATCTGCCATCCCCTGCATTACACTGTCATCATGAACTGGAGAGTGTG
CACAGTACTGGCTATTACTTCCTGGGCATGTGGATTTTCCCTGGCCCTCATAAATCTAAT
TCTCCTTCTAAGGCTGCCCTTCTGTGGGCCCCAGGAGGTGAACCACTTCTTCGGTGAAAT
TCTGTCTGTCCTCAAACTGGCCTGTGCAGACACCTGGATTAATGAAATTTTTGTCTTTGC
TGGTGGTGTGTTTGTCTTAGTCGGGCCCCTTTCCTTGATGCTGATCTCCTACATGCGCAT
CCTCTTGGCCATCCTGAAGATCCAGTCAAAGGAGGGCCGCAAAAAAGCCTTTTCCACCTG
CTCCTCCCACCTCTGTGTGGTTGGGCTTTACTTTGGCATGGCCATGGTGGTTTACCTGGT
CCCAGACAACAGTCAACGACAGAAGCAGCAGAAAATTCTCACCCTGTTTTACAGCCTTTT
CAACCCATTGCTGAACCCCCTCATCTACAGCCTGCGGAATGCTCAAGTGAAGGGTGCCTT
ATACAGAGCACTGCAGAAAAAGAGGACCATG
Conceptual translation MGDNQSRVTEFILVGFQLSVEMEVLLFWIFSLLYLFSLLANGMILGLICLDPRLRTPMYF
FLSHLAVIDIYYASSNLLNMLENL\NTKKTISFISCIMQMALYLTFAAAVCMILVVMSY
DRFVAICHPLHYTVIMNWRVCTVLAITSWACGFSLALINLILLLRLPFCGPQEVNHFFGE
ILSVLKLACADTWINEIFVFAGGVFVLVGPLSLMLISYMRILLAILKIQSKEGRKKAFST
CSSHLCVVGLYFGMAMVVYLVPDNSQRQKQQKILTLFYSLFNPLLNPLIYSLRNAQVKGA
LYRALQKKRTM

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
7 100 -100 SNP C/T 1000GP (YRI)
7 143,854,580 143,854,580 Del(1) -/A rs11324135 (DbSNP)
7 143,854,587 143,854,587 rescued_Del(-1) -/A rs59973247 (DbSNP)
7 143,854,974 143,854,974 SNP C/T rs59273599 (DbSNP)
7 143,855,048 143,855,048 SNP C/T rs61732630 (DbSNP)
7 143,855,135 143,855,135 SNP G/T rs61737634 (DbSNP)
7 143,855,227 143,855,227 SNP A/C rs62483763 (DbSNP)
7 144,157,406 144,157,406 SNP T/C 1000GP (CHBJPT)

Variations - CNVs

Chr Start End Type Sources
7 143,147,775 144,368,638 CopyNumber Variation_3708 (DGV)
7 143,217,296 144,074,520 CopyNumber Variation_32962 (DGV)
7 143,545,719 143,874,190 CopyNumber Variation_53583 (DGV)
7 143,572,286 143,866,532 CopyNumber Variation_8581 (DGV)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.