Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR2G2 Olfactory Receptor

Gene Symbol OR2G21 (View this gene in GeneCards)
Family 2
Subfamily G
Pseudogene No
CORP pseudogene probability score 1 (pseudogene)
Aliases OR1-32, HsOR1.5.4, ORL3042, ORL3054
External Ids HGNC: 15007   GeneBank: AB065621, BK004472, NM_001001915   ORDB: ORL3042, ORL3054   
Build #39 labels OR2G2
Chromosomal location 1:247,588,360-247,589,310 (+)
Cluster 1@248
Synteny CLIC#5
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR2B8P 61.72% 303
OR2G3 62.95% 305
OR2W6P 59.93% 307

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Chimp CONTIG*********** 95% 315
Cow OR2G28 82% 310

Expression evidences

Source Accession
GNF Atlas2 gnf1h11292_at

Sequence information

Nucleotide sequence ATGGGGATGGTGAGACATACCAATGAGAGCAACCTAGCAGGTTTCATCCTTTTAGGGTTT
TCTGATTATCCTCAGTTACAGAAGGTTCTATTTGTGCTCATATTGATTCTGTATTTACTA
ACTATTTTGGGGAATACCACCATCATTCTGGTTTCTCGTCTGGAACCCAAGCTTCATATG
CCGATGTATTTCTTCCTTTCTCATCTCTCCTTCCTGTACCGCTGCTTCACCAGCAGTGTT
ATTCCCCAGCTCCTGGTAAACCTGTGGGAACCCATGAAAACTATCGCCTATGGTGGCTGT
TTGGTTCACCTTTACAACTCCCATGCCCTGGGATCCACTGAGTGCGTCCTCCCGGCTGTG
ATGTCCTGTGACCGCTATGTGGCTGTCTGCCGTCCTCTCCATTACACTGTCTTAATGCAT
ATCCATCTCTGCATGGCCTTGGCATCTATGGCATGGCTCAGTGGAATAGCCACCACCCTG
GTACAGTCCACCCTCACCCTGCAGCTGCCCTTCTGTGGGCATCGCCAAGTGGATCATTTC
ATCTGCGAGGTCCCTGTGCTCATCAAGCTGGCTTGTGTGGGCACCACGTTTAACGAGGCT
GAGCTTTTTGTGGCTAGTATCCTTTTCCTTATAGTGCCTGTCTCATTCATCCTGGTCTCC
TCTGGCTACATTGCCCACGCAGTGTTGAGGATTAAGTCAGCTACCAGGAGACAGAAAGCA
TTCGGGACCTGCTTCTCCCACCTGACAGTGGTCACCATCTTTTATGGAACCATCATCTTC
ATGTATCTGCAGCCAGCCAAGAGTAGATCCAGGGACCAGGGCAAGTTTGTTTCTCTCTTC
TACACTGTGGTAACCCGCATGCTTAACCCTCTTATTTATACCTTGAGGATCAAGGAGGTG
AAAGGGGCATTAAAGAAAGTTCTAGCAAAGGCTCTGGGAGTAAATATTTTA
Conceptual translation MVRHTNESNLAGFILLGFSDYPQLQKVLFVLILILYLLTILGNTTIILVSRLEPKLHMPM
YFFLSHLSFLYRCFTSSVIPQLLVNLWEPMKTIAYGGCLVHLYNSHALGSTECVLPAVMS
CDRYVAVCRPLHYTVLMHIHLCMALASMAWLSGIATTLVQSTLTLQLPFCGHRQVDHFIC
EVPVLIKLACVGTTFNEAELFVASILFLIVPVSFILVSSGYIAHAVLRIKSATRRQKAFG
TCFSHLTVVTIFYGTIIFMYLQPAKSRSRDQGKFVSLFYTVVTRMLNPLIYTLRIKEVKG
ALKKVLAKALGVNIL

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
1 100 -100 NS C/G P/A 1000GP (YRI, YRI, YRI, YRI, YRI)
1 247,588,429 247,588,429 NS C/G P/A 1000GP (CEU)
1 247,588,662 247,588,662 NS G/T L/F 1000GP (CHBJPT)
1 247,588,717 247,588,717 NS G/C V/L 1000GP (CEU, CHBJPT)
1 247,588,807 247,588,807 NS A/G M/V 1000GP (CEU)
1 247,588,859 247,588,859 NS T/C L/P 1000GP (CEU, CHBJPT)
1 247,589,065 247,589,065 NS A/G R/G 1000GP (CEU, CHBJPT)
1 247,751,731 247,751,731 NS C/G P/A rs12737801 (DbSNP)
1 247,752,019 247,752,019 NS C/G L/V rs1151687 (DbSNP)
1 247,752,109 247,752,109 NS A/G M/V rs61732336 (DbSNP)
1 247,752,161 247,752,161 NS C/T P/L rs10925085 (DbSNP)
1 247,752,254 247,752,254 NS A/C N/T rs61735740 (DbSNP)
1 247,752,367 247,752,367 NS A/G R/G rs869111 (DbSNP)
1 247,752,518 247,752,518 NS A/G H/R rs74152638 (DbSNP)

Variations - CNVs

Chr Start End Type Sources
1 247,074,430 248,328,835 CopyNumber Variation_6816 (DGV)
1 247,714,585 248,277,146 CopyNumber Variation_3339 (DGV)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.

P24A R74G V120L M150V L167P R236G G242E R286H % Freq CORP
1 P R L M L R G R 24.81 1.000
2 P R L M P G G R 21.74 1.000
3 P R V M L R G R 16.74 1.000
4 P R V M P R G R 7.22 1.000
5 P R V M L G G R 6.53 1.000
6 A R L M L G G R 5.84 1.000
7 P R V V L G G R 3.76 1.000
8 P R V M P G G R 2.69 1.000
9 P R L M L G G R 1.61 1.000
10 A R V M L R G R 1.38 1.000
11 P R V V L R G R 1.31 1.000
12 P R V M L R E R 1.31 1.000
13 P R L V L R G R 1.23 1.000
14 P R L M P R G R 0.92 1.000
15 P G L M L R G R 0.84 1.000
16 P R V M L R G H 0.61 1.000
17 P R L V L G G R 0.31 1.000
18 A R V M P R G R 0.23 1.000
19 P R V V P R G R 0.23 1.000
20 A R L M L R G R 0.15 1.000
21 A R L M P G G R 0.15 1.000
22 A R L M P R G R 0.08 1.000
23 P R L V P R G R 0.08 1.000
24 A R V M L G G R 0.08 1.000
25 P R V M L G G H 0.08 1.000
26 P R V V P G G R 0.08 1.000

AceView Gene Models

The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.

Accession Type Chr Start End Strand
OR2G2.aApr07-unspliced main_exon CDS chr1 247,588,360 247,589,310 +
3UTR chr1 247,589,310 247,589,313 +