Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR4A7P Olfactory Receptor

Gene Symbol OR4A7P1 (View this gene in GeneCards)
Family 4
Subfamily A
Pseudogene Yes
CORP pseudogene probability score
Aliases OR11-109, HsOR11.10.3P, ORL3585
External Ids HGNC: 15164   GeneBank: BK004701, NG_004236   ORDB: ORL3585   
Build #39 labels OR4A7P
Chromosomal location 11:54,692,450-54,693,359 (-)
Cluster 11@51
Synteny CLIC#26
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR4A43P 91.75% 303

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR4A39 72% 299
Mouse Or4a39 73% 302
Rat Or4a77e 70% 302
Cow OR4A2 67% 300
Orang OR4A47P 63% 302
Horse OR4A124 74% 300
Chimp OR4A43P 89% 303

Sequence information

Nucleotide sequence ATGAGACTGAGTAGCGATGTTACAGCATTTGTCCTCCTAGGCCTTACTCAGGATCCTGAT
GTGTAAAATGCATTATTTGTCGTACATTTACTCACATACATTATGACTATGGTGGGGAAC
CTGCCCATTGTGGTGACTATTATTGCCACCCCCACCTTAGGCTCCCCAGTGTACTTCTTC
ATTGTCTGCTTGTCATTTATAGATGTTGTGTATTCCACCACCATTCCTCCCAAATTGATT
GTAAGCTATCTCCATGATAAAAAGACTATTTCCTTCCGAGCTTGCATGGGTCAGCCCTTT
TATAGACCACTTAGTTGGTGGTGCTGAGGCCTTCATTCTGTTGGTGATGGCCTATAATCG
CTATGTAGCCATCTGTAAGCCACTGCACTATTTCACCATCATGAATTGACAGGTTTGCAT
CCTTCTGTTGGTGGTGGCTGTCACTGCGGGTTTTGTGCATTCTGTGTTTCAAATTTTAGT
TGCGTACAGTCTCCTTTTCTGTGGTCCCAATATCATTGACCACTTTTTCTGTGACATGTA
CCCATTATTGGAACTGGCACACACTGACACCTACTTTATAGGCCTCACTGTTGTTGCCAA
TGGTGGAGGAATCTGTATGGTCTTGTTCATCCTTCTACTAATCTCCTGTGGGGTCATCCT
AATCTCCCTTAAAACTTATAGTCAGGAAGGGAGGCATAAAGCCCTGTCTACCTGCAGCTC
CCACATTACCGTGGTTGTCCTGTTTTTTGTTCCCTGTATTTTCCTGTATGTTAGACCTGT
TTCAAACTTTCCTATTAATAAATTCATTACTGTGTTTTATACAGTTATCACACCCATGTT
GAATCCATTAATATACACATTGAGAAACTGAGAGATGAAAAATGCTATAGGAAACCTCTG
GTGTAAATAT
Conceptual translation MRLSSDVTAFVLLGLTQDPDVXALFVVHLLTYIMTMVGNLPIVVTIIATPTLGSPVYFF
IVCLSFIDVVYSTTIPPKLIVSYLHDKKTISFRACMGQPF\DHLVGGAEAFILLVMAYN
RYVAICKPLHYFTIMNXVCILLLVVAVTAGFVHSVFQILVAYSLLFCGPNIIDHFFCDM
YPLLELAHTDTYFIGLTVVANGGGICMVLFILLLISCGVILISLKTYSQEGRHKALSTCS
SHITVVVLFFVPCIFLYVRPVSNFPINKFITVFYTVITPMLNPLIYTLRNXMKNAIGNL
WCKY

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
11 100 -100 SNP A/T 1000GP (YRI, YRI, YRI, YRI)
11 51,411,978 51,411,978 large insertion 14018bp insertion rs72488333 (DbSNP)
11 51,411,984 51,411,984 large insertion 14012bp insertion rs72488332 (DbSNP)
11 51,411,989 51,411,989 large insertion 14007bp insertion rs72488331 (DbSNP)
11 51,425,933 51,425,933 SNP A/T rs17156300 (DbSNP)
11 51,425,975 51,425,975 SNP C/T rs484052 (DbSNP)
11 51,426,023 51,426,023 SNP A/T rs72486117 (DbSNP)
11 51,426,066 51,426,066 SNP G/T rs5012446 (DbSNP)
11 51,426,071 51,426,071 SNP A/C rs5012447 (DbSNP)
11 51,426,095 51,426,095 SNP A/G rs5012448 (DbSNP)
11 51,426,096 51,426,096 SNP C/T rs5012449 (DbSNP)
11 51,426,182 51,426,182 SNP C/T rs5000498 (DbSNP)
11 51,426,207 51,426,207 SNP A/C rs5000499 (DbSNP)
11 51,426,238 51,426,238 SNP A/C rs5000500 (DbSNP)
11 51,426,239 51,426,239 SNP A/T rs5000501 (DbSNP)
11 51,426,461 51,426,461 SNP A/G rs561121 (DbSNP)
11 51,426,513 51,426,513 SNP C/T rs510697 (DbSNP)
11 51,426,572 51,426,572 SNP A/C rs11246555 (DbSNP)
11 51,426,624 51,426,624 SNP A/G rs61891390 (DbSNP)
11 51,426,645 51,426,645 SNP A/G rs17569863 (DbSNP)
11 51,426,661 51,426,661 SNP C/T rs61891391 (DbSNP)
11 54,692,601 54,692,601 SNP G/T 1000GP (CEU)
11 54,692,618 54,692,618 SNP C/T 1000GP (CEU)
11 54,692,634 54,692,634 SNP A/G 1000GP (CEU)
11 54,692,707 54,692,707 SNP A/C 1000GP (CEU, CHBJPT)
11 54,692,766 54,692,766 SNP C/T 1000GP (CEU, CHBJPT)
11 54,693,046 54,693,046 SNP G/A 1000GP (CEU)
11 54,693,072 54,693,072 SNP A/C 1000GP (CEU, CHBJPT)
11 54,693,256 54,693,256 SNP A/T 1000GP (CEU, CHBJPT)

Variations - CNVs

Chr Start End Type Sources
11 51,192,824 51,563,636 CopyNumber Variation_8689 (DGV)
11 51,228,146 51,525,878 CopyNumber Variation_48823 (DGV)
11 51,372,036 51,529,002 CopyNumber Variation_53111 (DGV)
11 51,423,920 51,426,929 Deletion #273 (Waszak)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.