Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR51K1P Olfactory Receptor

Gene Symbol OR51K1P1 (View this gene in GeneCards)
Family 51
Subfamily K
Pseudogene Yes
CORP pseudogene probability score
Aliases HsOR11.3.64P, ORL3524
External Ids HGNC: 15202   GeneBank: AB065551, NG_004226   ORDB: ORL3524   
Build #39 labels OR51K1P
Chromosomal location 11:5,430,656-5,431,602 (-)
Cluster 11@5
Synteny CLIC#23
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR51F5P 54.36% 298
OR51I2 56.46% 294
OR51L1 55.7% 298

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR51K1 91% 314
Chimp CONTIG*********** 96% 316
Mouse Or51k1 89% 313
Rat Or51k1 90% 316
Cow OR51K1 89% 316

Sequence information

Nucleotide sequence ATGGGAGCTGAAAGCAATGAAAGTCTTGACCTCCTATCTGTCTTCCTGACTGGCATCCCA
GGACTGGAGGCCCAACATGGTTGGCTCTCCATCCCTTTCTTCACCATGTACATTGTGGCC
ATTGTGGGAAACATCCTAATTATGGCAGCAGTGCAGGAAGACTCTGCCCTACATGAGCCC
ATGTACTTATTTCTCTCCATGTTGGCTGTCACTGAGGTGGGCGTCTCTGTGTCTACACTG
CTACTGTTACAGGCATTCTTTGGTTTGATGCCCACAGAGTTGACTTTGATGGCTGCCTGG
CCCAGATGTTCTTCATTCACACCTTCTCCTGCATGGAGTCAGGGGTCCTACTAGCCATGA
GCTATGACCGCTTTGTAGCCATCTACAACCTCCTGCGCTATACAGCCATCCTGACCCTGC
CCCGTATTATCTGCATGGGTCTGGGCATTACACTGAAGAGTGTGGCACTCATGGCCCCAC
TTCCAATCCTTTTGAGGCAACTGCCCTATTGCCACACTAATGTCCTCTCACACTCCTACT
GCCTCCACTCAGATCTGATCCAGCTGCCTTGTGCAGATACTAAACTCAACAGCATCCTGG
GCTTAGCCATTGTTCTCGCAAATTTCGGGCTGGACTCATTGCTTATCGTGGTCTCTTATG
TCTTGATTCTTTATACAGTGATGGGCATTGCTTCTGGAGAGGGACGGTGGAAGGCTCTCA
ACACATGTGTGTCACATATTTGTGCAGTGCTTATATATTATGTGCCCATGATTGGGGTGT
CTGTGATGCATCGTGCTGCCAAACATGCTTCTCCCATTGTCCACACACTTATGTCTAGCA
TCTGCCTTTTGGTGCCACCTGTACTTAATCCCATCATCTATAGTGTTAAGACCCAGACAA
TAAGACAGGGAATTCTCACCTTGTTTTCCTGCAAGAGGGAATTGCTC
Conceptual translation MGAESNESLDLLSVFLTGIPGLEAQHGWLSIPFFTMYIVAIVGNILIMAAVQEDSALHEP
MYLFLSMLAVTEVGVSVSTL/TVTGILWFDAHRVDFDGCLAQMFFIHTFSCMESGVLLA
MSYDRFVAIYNLLRYTAILTLPRIICMGLGITLKSVALMAPLPILLRQLPYCHTNVLSHS
YCLHSDLIQLPCADTKLNSILGLAIVLANFGLDSLLIVVSYVLILYTVMGIASGEGRWKA
LNTCVSHICAVLIYYVPMIGVSVMHRAAKHASPIVHTLMSSICLLVPPVLNPIIYSVKTQ
TIRQGILTLFSCKRELL

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
11 100 -100 SNP G/A 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI)
11 5,430,710 5,430,710 SNP G/T 1000GP (CEU, CHBJPT)
11 5,430,759 5,430,759 SNP C/T 1000GP (CEU)
11 5,431,068 5,431,068 SNP G/A 1000GP (CEU, CHBJPT)
11 5,431,188 5,431,188 SNP G/A 1000GP (CEU, CHBJPT)
11 5,431,207 5,431,207 SNP G/A 1000GP (CEU, CHBJPT)
11 5,431,212 5,431,212 SNP A/G 1000GP (CEU, CHBJPT)
11 5,431,296 5,431,296 SNP A/G 1000GP (CEU, CHBJPT)
11 5,431,336 5,431,336 SNP C/G 1000GP (CEU, CHBJPT)
11 5,431,439 5,431,439 SNP G/C 1000GP (CHBJPT)
11 5,431,444 5,431,444 SNP T/C 1000GP (CEU, CHBJPT)
11 5,431,480 5,431,480 SNP A/C 1000GP (CEU)
11 5,451,918 5,451,918 SNP G/A rs883689 (DbSNP)
11 5,451,940 5,451,940 SNP G/T rs60764921 (DbSNP)
11 5,452,298 5,452,298 SNP A/G rs60189221 (DbSNP)
11 5,452,340 5,452,340 Del(1) -/A rs35520332 (DbSNP)
11 5,452,418 5,452,418 SNP G/A rs1566278 (DbSNP)
11 5,452,437 5,452,437 SNP G/A rs1566277 (DbSNP)
11 5,452,442 5,452,442 SNP G/A rs1566276 (DbSNP)
11 5,452,526 5,452,526 SNP A/G rs10838096 (DbSNP)
11 5,452,566 5,452,566 SNP C/G rs1874827 (DbSNP)
11 5,452,674 5,452,674 SNP T/C rs1874826 (DbSNP)
11 5,452,710 5,452,710 SNP A/C rs11037425 (DbSNP)

Variations - CNVs

Chr Start End Type Sources
11 5,416,622 5,492,033 CopyNumber Variation_2901 (DGV)
11 5,431,984 5,493,309 CopyNumber Variation_9174 (DGV)
11 5,449,886 5,452,932 CopyNumber #122 (Waszak)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.