OR51M1 Olfactory Receptor
| Gene Symbol | OR51M11 (View this gene in GeneCards) |
| Family | 51 |
| Subfamily | M |
| Pseudogene | No |
| CORP pseudogene probability score | |
| Aliases | HsOR11.3.61, ORL3291 |
| External Ids | HGNC: 14847 ORDB: ORL3291 |
| Build #39 labels | OR51M1 |
| Chromosomal location | 11:5,389,432-5,390,376 (+) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR51F5P | 52.81% | 303 |
| OR51G1 | 54.1% | 305 |
| OR51G2 | 54.64% | 291 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR51L2 | 54% | 307 |
| Mouse | Or51m1 | 84% | 315 |
| Rat | Or51m1 | 83% | 251 |
| Cow | OR51M1BP | 82% | 308 |
| Orang | OR51M1P | 96% | 315 |
| Horse | OR51F5 | 54% | 303 |
| Chimp | OR51G1 | 55% | 294 |
Expression evidences
| Source | Accession |
|---|---|
| mRNA | BC136913 |
Sequence information
| Nucleotide sequence |
ATGCTGCTATCCAACATTACTCAGTTTAGCCCCATATTCTATCTCACCAGCTTTCCTGGA TTGGAAGGCATCAAACACTGGATTTTCATCCCCTTTTTCTTTATGTACATGGTTGCCATC TCAGGCAATTGTTTCATTCTGATCATTATTAAGACCAACCCTCGTCTGCACACACCCATG TACTATCTACTATCCTTGCTGGCCCTCACTGACCTGGGGCTGTGTGTGTCCACGTTGCCC ACCACTATGGGGATCTTCTGGTTTAACTCCCATAGTATCTACTTTGGAGCGTGTCAAATC CAGATGTTCTGCATCCACTCTTTTTCCTTCATGGAGTCCTCAGTGCTCCTCATGATGTCC TTTGACCGCCTTGTGGCCATCTGCCACCCTCTGAGGTATTCGGTCATTATCACTGGCCAG CAAGTGGTCAGAGCAGGCCTAATTGTCATCTTCCGGGGACCTGTGGCCACTATCCCTATT GTCCTCCTCCTGAAGGCTTTTCCCTACTGTGGATCTGTGGTCCTCTCCCACTCATTTTGC CTGCACCAGGAAGTGATACAGCTGGCCTGCACAGATATCACCTTCAATAATCTGTATGGA CTGATGGTGGTAGTTTTCACTGTGATGCTGGACCTGGTGCTCATCGCACTGTCCTATGGA CTCATCCTGCACACAGTAGCAGGCCTGGCCTCCCAAGAGGAGCAGCGCCGTGCCTTTCAG ACATGCACCGCTCCTCTCTGTGCTGTGCTAGTATTCTTTGTGCCCATGATGGGGCTGTCC CTGGTGCACCGTTTTGGGAAGCATGCCCCACCTGCTATTCATCTTCTTATGGCCAATGTC TACCTTTTTGTGCCTCCCATGCTTAACCCAATCATATACAGCATTAAGACCAAGGAGATC CACCGTGCCATTATCAAGTTCCTAGGTCTTAAAAAGGCCAGTAAA |
| Conceptual translation |
MLLSNITQFSPIFYLTSFPGLEGIKHWIFIPFFFMYMVAISGNCFILIIIKTNPRLHTPM YYLLSLLALTDLGLCVSTLPTTMGIFWFNSHSIYFGACQIQMFCIHSFSFMESSVLLMMS FDRLVAICHPLRYSVIITGQQVVRAGLIVIFRGPVATIPIVLLLKAFPYCGSVVLSHSFC LHQEVIQLACTDITFNNLYGLMVVVFTVMLDLVLIALSYGLILHTVAGLASQEEQRRAFQ TCTAPLCAVLVFFVPMMGLSLVHRFGKHAPPAIHLLMANVYLFVPPMLNPIIYSIKTKEI HRAIIKFLGLKKASK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | NS | C/A | N/K | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) |
| 11 | 100 | -100 | SYN | G/A | K/K | 1000GP (YRI) |
| 11 | 5,389,704 | 5,389,704 | NS | T/G | H/Q | 1000GP (CEU, CHBJPT) |
| 11 | 5,389,801 | 5,389,801 | NS | C/T | L/F | 1000GP (CEU, CHBJPT) |
| 11 | 5,390,009 | 5,390,009 | NS | T/C | I/T | 1000GP (CEU, CHBJPT) |
| 11 | 5,390,160 | 5,390,160 | SYN | C/T | T/T | 1000GP (CHBJPT) |
| 11 | 5,390,165 | 5,390,165 | NS | C/A | P/H | 1000GP (CEU, CHBJPT) |
| 11 | 5,390,168 | 5,390,168 | NS | T/G | L/R | 1000GP (CEU, CHBJPT) |
| 11 | 5,390,243 | 5,390,243 | NS | C/A | P/H | 1000GP (CEU) |
| 11 | 5,390,349 | 5,390,349 | SYN | G/A | K/K | 1000GP (CEU, CHBJPT) |
| 11 | 5,390,350 | 5,390,350 | NS | T/C | F/L | 1000GP (CEU, CHBJPT) |
| 11 | 5,410,934 | 5,410,934 | NS | G/T | Q/H | rs1498467 (DbSNP) |
| 11 | 5,411,031 | 5,411,031 | NS | C/T | L/F | rs1498468 (DbSNP) |
| 11 | 5,411,239 | 5,411,239 | NS | C/T | T/I | rs1498469 (DbSNP) |
| 11 | 5,411,395 | 5,411,395 | NS | A/C | H/P | rs9783355 (DbSNP) |
| 11 | 5,411,398 | 5,411,398 | NS | T/G | L/R | rs2736531 (DbSNP) |
| 11 | 5,411,579 | 5,411,579 | In-Del(1) | T/GT | rs10768906 (DbSNP) | |
| 11 | 5,411,579 | 5,411,579 | SYN | A/G | K/K | rs57901682 (DbSNP) |
| 11 | 5,411,580 | 5,411,580 | NS | C/T | L/F | rs10768907 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 5,409,794 | 5,412,609 | CopyNumber | Variation_71261 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
| N16K | H102Q | R134C | P165L | I204T | F318L | % Freq | CORP | |
|---|---|---|---|---|---|---|---|---|
| 1 | N | Q | R | P | T | L | 69.28 | 0.092 |
| 2 | N | H | R | P | I | F | 25.81 | 0.092 |
| 3 | K | H | R | P | I | F | 2.69 | 0.092 |
| 4 | N | H | C | L | T | L | 1.54 | 0.092 |
| 5 | N | Q | R | P | T | F | 0.46 | 0.092 |
| 6 | N | Q | C | P | T | L | 0.15 | 0.092 |
| 7 | N | Q | R | P | I | L | 0.08 | 0.092 |
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR51M1.aApr07-unspliced | main_exon | 5UTR | chr11 | 5,389,399 | 5,389,432 | + |
| CDS | chr11 | 5,389,432 | 5,390,376 | + | ||
| 3UTR | chr11 | 5,390,376 | 5,390,379 | + | ||