Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

Select ORs from

Family: Subfamily:

Chromosome:

OR51V1 Olfactory Receptor

Gene Symbol OR51V11 (View this gene in GeneCards)
Family 51
Subfamily V
Pseudogene No
CORP pseudogene probability score 0.35 (functional)
Aliases
External Ids HGNC: 19597   GeneBank: BK004432, NM_001004760   
Build #39 labels
Chromosomal location 11:5,199,738-5,200,682 (-)
Cluster 11@5
Synteny CLIC#23
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR51B5 53.42% 307
OR51F5P 55.52% 299
OR51L1 53.42% 307

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR51V1B 81% 304
Mouse Or51v8 76% 306
Rat Or51v8b 77% 306
Cow OR51V1DP 88% 303
Orang OR51V23 77% 309
Horse OR51V26 78% 306
Chimp OR51L1 54% 307

Expression evidences

Source Accession
mRNA AB528808

Sequence information

Nucleotide sequence ATGATTACTTCAGTAAGCCCTAGCACCAGCACGAATTCTTCCTTTCTTCTCACTGGATTT
TCTGGCATGGAGCAGCAATACCCCTGGCTTTCCATCCCCTTCTCCTCAATCTATGCCATG
GTGCTTTTGGGCAATTGCATGGTTCTCCATGTGATATGGACTGAGCCAAGCCTGCACCAG
CCTATGTTTTACTTCCTGTCCATGCTGGCCCTCACTGACCTGTGCATGGGGCTGTCCACT
GTGTACACAGTGCTGGGGATCCTGTGGGGGATCATTCGAGAGATCAGCTTGGATTCCTGC
ATTGCCCAGTCCTATTTCATCCATGGTCTGTCCTTCATGGAGTCCTCTGTCCTCCTCACT
ATGGCCTTTGACCGGTACATTGCAATTTGCAATCCACTACGTTATTCCTCCATCCTGACT
AATTCCAGAATTATCAAAATTGGGCTCACTATAATAGGTAGGAGTTTTTTCTTTATTACA
CCCCCCATCATCTGTCTGAAATTTTTTAATTACTGTCATTTCCACATCCTTTCTCACTCT
TTCTGCCTGCACCAGGATCTTCTCCGCTTAGCCTGTTCAGACATCCGATTCAATAGTTAC
TATGCCCTGATGCTGGTTATTTGCATACTGTTGTTGGATGCTATACTCATCCTTTTCTCC
TACATCCTGATTCTTAAGTCAGTCCTGGCAGTTGCCTCTCAGGAAGAGAGGCATAAATTA
TTTCAGACCTGCATCTCCCACATCTGTGCTGTCCTTGTGTTCTACATCCCTATCATTAGC
CTCACAATGGTGCACCGTTTTGGCAAGCACCTTTCCCCCGTGGCCCACGTTCTCATTGGC
AACATCTACATCCTTTTCCCACCTTTAATGAATCCCATCATCTACAGTGTCAAGACCCAA
CAGATTCATACCAGAATGCTTAGACTCTTTTCTCTGAAAAGATAT
Conceptual translation MITSVSPSTSTNSSFLLTGFSGMEQQYPWLSIPFSSIYAMVLLGNCMVLHVIWTEPSLHQ
PMFYFLSMLALTDLCMGLSTVYTVLGILWGIIREISLDSCIAQSYFIHGLSFMESSVLLT
MAFDRYIAICNPLRYSSILTNSRIIKIGLTIIGRSFFFITPPIICLKFFNYCHFHILSHS
FCLHQDLLRLACSDIRFNSYYALMLVICILLLDAILILFSYILILKSVLAVASQEERHKL
FQTCISHICAVLVFYIPIISLTMVHRFGKHLSPVAHVLIGNIYILFPPLMNPIIYSVKTQ
QIHTRMLRLFSLKRY

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
11 5,215,518 5,215,518 large insertion 49939bp insertion rs63751627 (DbSNP)
11 5,221,645 5,221,645 NS A/C/G W/G rs11512276 (DbSNP)
11 5,221,825 5,221,825 NS A/G F/L rs11036212 (DbSNP)
11 5,221,233 5,221,233 NS A/G L/S rs7933549 (DbSNP)
11 5,221,754 5,221,754 NS C/G W/C rs61738413 (DbSNP)
11 5,221,132 5,221,132 NS G/A L/F rs61736992 (DbSNP)
11 5,221,449 5,221,449 NS T/C N/S rs61732434 (DbSNP)
11 5,221,424 5,221,424 SYN A/G I/I rs7933718 (DbSNP)
11 5,221,229 5,221,229 SYN G/A V/V rs61735021 (DbSNP)
11 5,221,076 5,221,076 SYN G/A I/I rs61735483 (DbSNP)
11 5,200,595 5,200,595 NS G/A L/F 1000GP (CEU, CHBJPT)
11 5,200,046 5,200,046 NS C/T D/N 1000GP (CEU)
11 5,200,584 5,200,584 SYN G/A P/P 1000GP (CEU)
11 5,200,415 5,200,415 NS C/A G/W 1000GP (CEU, CHBJPT)
11 100 -100 SYN A/G I/I 1000GP (YRI, YRI, YRI)
11 100 -100 NS G/A L/F 1000GP (YRI, YRI, YRI, YRI, YRI, YRI)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.

I308S L267F S233L I133T P62L L36F S16R % Freq CORP
1 I L S I P F S 59.68 0.203
2 I L S I P L S 32.26 0.203
3 I L L I P L S 5.07 0.203
4 I F S I P F S 1.54 0.203
5 I L S I P L R 0.54 0.203
6 I L S I L L S 0.46 0.203
7 S L S I P F S 0.23 0.203
8 I L S T P F S 0.15 0.203
9 I L L I P F S 0.08 0.203

AceView Gene Models

The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.

Accession Type Chr Start End Strand
OR51V1.aApr07-unspliced main_exon 3UTR chr11 5,199,735 5,199,738 -
CDS chr11 5,199,738 5,200,682 -
5UTR chr11 5,200,682 5,200,700 -