OR51V1 Olfactory Receptor
| Gene Symbol | OR51V11 (View this gene in GeneCards) |
| Family | 51 |
| Subfamily | V |
| Pseudogene | No |
| CORP pseudogene probability score | 0.35 (functional) |
| Aliases | |
| External Ids | HGNC: 19597 GeneBank: BK004432, NM_001004760 |
| Build #39 labels | |
| Chromosomal location | 11:5,199,738-5,200,682 (-) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR51B5 | 53.42% | 307 |
| OR51F5P | 55.52% | 299 |
| OR51L1 | 53.42% | 307 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR51V1B | 81% | 304 |
| Mouse | Or51v8 | 76% | 306 |
| Rat | Or51v8b | 77% | 306 |
| Cow | OR51V1DP | 88% | 303 |
| Orang | OR51V23 | 77% | 309 |
| Horse | OR51V26 | 78% | 306 |
| Chimp | OR51L1 | 54% | 307 |
Expression evidences
| Source | Accession |
|---|---|
| mRNA | AB528808 |
Sequence information
| Nucleotide sequence |
ATGATTACTTCAGTAAGCCCTAGCACCAGCACGAATTCTTCCTTTCTTCTCACTGGATTT TCTGGCATGGAGCAGCAATACCCCTGGCTTTCCATCCCCTTCTCCTCAATCTATGCCATG GTGCTTTTGGGCAATTGCATGGTTCTCCATGTGATATGGACTGAGCCAAGCCTGCACCAG CCTATGTTTTACTTCCTGTCCATGCTGGCCCTCACTGACCTGTGCATGGGGCTGTCCACT GTGTACACAGTGCTGGGGATCCTGTGGGGGATCATTCGAGAGATCAGCTTGGATTCCTGC ATTGCCCAGTCCTATTTCATCCATGGTCTGTCCTTCATGGAGTCCTCTGTCCTCCTCACT ATGGCCTTTGACCGGTACATTGCAATTTGCAATCCACTACGTTATTCCTCCATCCTGACT AATTCCAGAATTATCAAAATTGGGCTCACTATAATAGGTAGGAGTTTTTTCTTTATTACA CCCCCCATCATCTGTCTGAAATTTTTTAATTACTGTCATTTCCACATCCTTTCTCACTCT TTCTGCCTGCACCAGGATCTTCTCCGCTTAGCCTGTTCAGACATCCGATTCAATAGTTAC TATGCCCTGATGCTGGTTATTTGCATACTGTTGTTGGATGCTATACTCATCCTTTTCTCC TACATCCTGATTCTTAAGTCAGTCCTGGCAGTTGCCTCTCAGGAAGAGAGGCATAAATTA TTTCAGACCTGCATCTCCCACATCTGTGCTGTCCTTGTGTTCTACATCCCTATCATTAGC CTCACAATGGTGCACCGTTTTGGCAAGCACCTTTCCCCCGTGGCCCACGTTCTCATTGGC AACATCTACATCCTTTTCCCACCTTTAATGAATCCCATCATCTACAGTGTCAAGACCCAA CAGATTCATACCAGAATGCTTAGACTCTTTTCTCTGAAAAGATAT |
| Conceptual translation |
MITSVSPSTSTNSSFLLTGFSGMEQQYPWLSIPFSSIYAMVLLGNCMVLHVIWTEPSLHQ PMFYFLSMLALTDLCMGLSTVYTVLGILWGIIREISLDSCIAQSYFIHGLSFMESSVLLT MAFDRYIAICNPLRYSSILTNSRIIKIGLTIIGRSFFFITPPIICLKFFNYCHFHILSHS FCLHQDLLRLACSDIRFNSYYALMLVICILLLDAILILFSYILILKSVLAVASQEERHKL FQTCISHICAVLVFYIPIISLTMVHRFGKHLSPVAHVLIGNIYILFPPLMNPIIYSVKTQ QIHTRMLRLFSLKRY Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | NS | G/A | L/F | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI) |
| 11 | 100 | -100 | SYN | A/G | I/I | 1000GP (YRI, YRI, YRI) |
| 11 | 5,200,046 | 5,200,046 | NS | C/T | D/N | 1000GP (CEU) |
| 11 | 5,200,415 | 5,200,415 | NS | C/A | G/W | 1000GP (CEU, CHBJPT) |
| 11 | 5,200,584 | 5,200,584 | SYN | G/A | P/P | 1000GP (CEU) |
| 11 | 5,200,595 | 5,200,595 | NS | G/A | L/F | 1000GP (CEU, CHBJPT) |
| 11 | 5,215,518 | 5,215,518 | large insertion | 49939bp insertion | rs63751627 (DbSNP) | |
| 11 | 5,221,076 | 5,221,076 | SYN | G/A | I/I | rs61735483 (DbSNP) |
| 11 | 5,221,132 | 5,221,132 | NS | G/A | L/F | rs61736992 (DbSNP) |
| 11 | 5,221,229 | 5,221,229 | SYN | G/A | V/V | rs61735021 (DbSNP) |
| 11 | 5,221,233 | 5,221,233 | NS | A/G | L/S | rs7933549 (DbSNP) |
| 11 | 5,221,424 | 5,221,424 | SYN | A/G | I/I | rs7933718 (DbSNP) |
| 11 | 5,221,449 | 5,221,449 | NS | T/C | N/S | rs61732434 (DbSNP) |
| 11 | 5,221,645 | 5,221,645 | NS | A/C/G | W/G | rs11512276 (DbSNP) |
| 11 | 5,221,754 | 5,221,754 | NS | C/G | W/C | rs61738413 (DbSNP) |
| 11 | 5,221,825 | 5,221,825 | NS | A/G | F/L | rs11036212 (DbSNP) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
| I308S | L267F | S233L | I133T | P62L | L36F | S16R | % Freq | CORP | |
|---|---|---|---|---|---|---|---|---|---|
| 1 | I | L | S | I | P | F | S | 59.68 | 0.203 |
| 2 | I | L | S | I | P | L | S | 32.26 | 0.203 |
| 3 | I | L | L | I | P | L | S | 5.07 | 0.203 |
| 4 | I | F | S | I | P | F | S | 1.54 | 0.203 |
| 5 | I | L | S | I | P | L | R | 0.54 | 0.203 |
| 6 | I | L | S | I | L | L | S | 0.46 | 0.203 |
| 7 | S | L | S | I | P | F | S | 0.23 | 0.203 |
| 8 | I | L | S | T | P | F | S | 0.15 | 0.203 |
| 9 | I | L | L | I | P | F | S | 0.08 | 0.203 |
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR51V1.aApr07-unspliced | main_exon | 3UTR | chr11 | 5,199,735 | 5,199,738 | - |
| CDS | chr11 | 5,199,738 | 5,200,682 | - | ||
| 5UTR | chr11 | 5,200,682 | 5,200,700 | - | ||