Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR5BD1P Olfactory Receptor

Gene Symbol OR5BD1P1 (View this gene in GeneCards)
Family 5
Subfamily BD
Pseudogene Yes
CORP pseudogene probability score
Aliases ORL3515
External Ids HGNC: 14843   GeneBank: NG_002253   ORDB: ORL3515   
Build #39 labels OR5BD1P
Chromosomal location 11:57,945,555-57,946,471 (-)
Cluster 11@58
Synteny CLIC#27
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR5AZ1P 50.54% 279

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR5AZ2 68% 275
Mouse Or5g25 42% 279
Rat Or5g25 42% 282
Cow OR5AZ2 63% 294
Orang OR5AZ1P 50% 286
Horse OR5AZ2 66% 297
Chimp OR5AZ1P 49% 285

Sequence information

Nucleotide sequence ATGCCAGCCTGGGCAATGAGAGAGAAACCCTGTAAAAAAAAAAAAAAACACTCCTCACTC
CTCTTTGCTGTCTTCCTGCTGACCTACTCCGTGACTCTGGTGGGCAACCTGGGCATGACA
GATCTGATCTGCCAATCTGCACCAGCTCTGCCCTCCACACCCCCATGTGCTTCCTCCTGA
GCGTATTCTCCTTCCTAGACATCTGCAGTTCCTCCATGTGCACCCCAGGCTGCTGATCCA
CTTTCTCACCACTAACCATCCATCTCCTTTGCAGGTGGTATAATCCAGATGGCCCTCATG
ACCTTCTATGGCACAGGGGAATGTCTGCTGCTGGCCATCGTAGCCTATGACTGAGTTGTG
GCCATTTGCCACCCTTTCCCCTAGCATATCATCATGTCCAAGGGGACTGTGTGCCCAGCT
GGTGGTGGTTACCTCTGCTGTGGGGGTGCTCATTTCAGCTCTAGACAGGATGCATTCATC
TCGCCCTACCGTGGCCTAACATCATTGATCATTACTATGTTCTGTTACATTCCCCACCCC
CATGCTCCAACTGGCCTGCTCAGATGCCACTGTGGCCAACATGATCCTGTTTGTCTCTTC
TGCCTTGATCACTATCCCTACCATCTCAGTCATCTTGGTCTCTTACACTTACATCCTGGT
TAATCAGTGGGATGAGGTCCCTGGATGCCCAGTGCAAAGCTTTCTCCACTCGTGCCTCCC
ACCTCACTGCTCACTGCCTGTTTTATGGGTTTGTGTTCCTTGTATACATTCCACCCAACC
CTGAAATGGCCTCAGCCTATAACAAAATCCTCTTCACCGTTGTGATCCCCATGCTGAACC
TCCTGGTCTAAGGCCTGAGAAATAAAGATGTCAAAGTCGGCTGGGTGCTGTGGCTCTTGC
CTGTAACACCAGTACTT
Conceptual translation MPAWAMREKPCKKKKKHSSLLFAVFLLTYSVTLVGNLGMTDLICQS/TSSALHTPMCFL
LSVFSFLDICSSS/VHPRLLIHFLTT/PSISFAGGIIQMALMTFYGTGECLLLAIVAY
DXVAICHPFPXIIMSKG\CAQLVVVTSAVGVLISA/RQDAFISPYRG/NIIDHY/br/>YCSVTFPTPMLQLACSDATVANMILFVSSALITIPTISVILVSYTYILVN/V/MRSLD
AQCKAFSTRASHLTAHCLFYGFVFLVYIPPNPEMASAYNKILFTVVIPMLNLLVXLRNK
DVKVGWVLWLLPVTPVL

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
11 57,713,906 57,713,905 Ins(10) -/TTTTTTTTTT rs34535093 (DbSNP)
11 57,713,896 57,713,895 Ins(2) -/AA rs3974379 (DbSNP)
11 57,713,901 57,713,900 Ins(3) -/TTT rs72062999 (DbSNP)
11 57,713,908 57,713,907 Ins(9) -/GTTTTTTTT rs58726211 (DbSNP)
11 57,713,909 57,713,908 Ins(9) -/GTTTTTTTT rs72107590 (DbSNP)
11 57,713,912 57,713,911 Ins(9) -/TTTTTTTTT rs35394544 (DbSNP)
11 57,713,911 57,713,910 Ins(9) -/TTTTTTTTT rs10523002 (DbSNP)
11 57,713,903 57,713,902 Ins(9) -/TTTTTTTTT rs10667707 (DbSNP)
11 57,713,781 57,713,781 SNP A/G rs4245215 (DbSNP)
11 57,713,169 57,713,169 SNP A/G rs11826642 (DbSNP)
11 57,713,346 57,713,346 SNP A/G rs10792120 (DbSNP)
11 57,713,538 57,713,538 SNP A/T rs4293137 (DbSNP)
11 57,713,899 57,713,899 SNP G/T rs12792492 (DbSNP)
11 57,713,664 57,713,664 SNP T/C rs1995884 (DbSNP)
11 57,713,903 57,713,904 Ins(10) -/TTTTTTTTT/TTTTTTTTTT rs10636902 (DbSNP)
11 57,945,726 57,945,726 SNP A/G 1000GP (CEU)
11 57,945,874 57,945,874 SNP A/G 1000GP (CEU, CHBJPT)
11 57,946,192 57,946,192 SNP T/C 1000GP (CEU, CHBJPT)
11 57,946,309 57,946,309 SNP G/A 1000GP (CEU, CHBJPT)
11 57,945,978 57,945,978 SNP C/A 1000GP (CHBJPT)
11 57,946,104 57,946,104 SNP C/A 1000GP (CHBJPT)
11 100 -100 SNP A/G 1000GP (YRI, YRI, YRI, YRI)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.