Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

Select ORs from

Family: Subfamily:

Chromosome:

OR5BH1P Olfactory Receptor

Gene Symbol OR5BH1P1 (View this gene in GeneCards)
Family 5
Subfamily BH
Pseudogene Yes
CORP pseudogene probability score
Aliases HsORX.1.3P, ORL4079
External Ids HGNC: 15407   GeneBank: NG_004157   ORDB: ORL4079   
Build #39 labels OR5BH1P, OR5BH2P
Chromosomal location X:131,398,049-131,398,957 (-)
Cluster X@131a
Synteny CLIC#48
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR5F1 46.64% 298
OR5F2P 46.15% 299
OR5G1P 49.67% 300

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR5BH3 76% 303
Mouse Or5bh3 74% 300
Rat Or5bh3 74% 300
Cow OR5BH4P 67% 302
Orang OR5G1 50% 298
Horse OR5BH5 76% 303
Chimp OR5G1 50% 300

Expression evidences

Source Accession
ESTs BE152503

Sequence information

Nucleotide sequence ATGGTGACTGACTTCATCTTTCTCGGCATGACAGATAACTCTCAGCTTGAAGTCCTGCTA
TTTGGAGTCTTTCTTATTGCTTACATCATCACTGTGTTGGAGAATCTAGGCCTTGTGGTT
CTGATCAGAGTCAGCTCCCGCCTCCACACCCCATGTACTTTTTCCTCTCTAATCAGTCCT
TCCTTGATGTCTGTTTCTCTTCCATTACAATTCCACAGAATTTAGCACATTTGTTTTCTA
AGCTGCAGTATGTTTCTTTCCTTTTCCCGTATAACTTAAATGAGCTTGTTTGTAATCTTT
GCCTCTGCTGAATGCAATTTTTTAAACTTGCATGGCCTATGACCGCTTTACTGCCATCTG
TCACCCACTGTTCTACCACATTACCATGTCAAGAGGCCATTATCTTTTCTTGGTAGCAGG
ATGCTACCTTGGTGGGTTAGTTAAGATGGTCACTGTGACAACTTCCATCACACAACTATC
GCTTTGTCAACCATGTGTCCTCCCTGCCTTCTTCTGTGACATTCCCTCATTGTTGGTACT
GGTTTGCTCAGATCCTTGGATCACCTCCCGATCTTGGTGGTTGGCTGTGGGGGATTCACC
CTGGTCACCTCTGTTGTGGTGATCCTTGTCTCCTACATGTCTTCCCTCATGACTATCCTA
GGAATTCCCTTAGCTTCTGGAAAACAGAGAGCCTTCTCCACCTGTGCCTCCCACTTGACT
GCTGTTAGCCTGTACTATGAAACAACTATGTACACTTACTTGCCCGCCTCGCGACATGGA
TCCGGGGCAGGAAATCAGATTGTGTCAGTATTTTATACAATGGTGATCCCCATGTTAAAT
CCTCTCATCTATAGTTTGAGAAATGAGGAAGTGAAAGTTGCCCTATGAAAAACATTGAGA
CATAGTCCT
Conceptual translation MVTDFIFLGMTDNSQLEVLLFGVFLIAYIITVLENLGLVVLIRVSSRLH/PMYFFLSNQ
SFLDVCFSSITIPQNLAHLFSKLQYVSFL\RITXSLFVIFASAECNFL\CMAYDRFT
AICHPLFYHITMSRGHYLFLVAGCYLGGLVKMVTVTTSITQLSLCQPCVLPAFFCDIPSL
LVLVCSD/LDHLPILVVGCGGFTLVTSVVVILVSYMSSLMTILGIPLASGKQRAFSTCA
SHLTAVSLYYETTMYTYLPASRHGSGAGNQIVSVFYTMVIPMLNPLIYSLRNEEVKVALXbr/>KTLRHSP

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
X 130,532,111 130,532,111 SNP A/G rs2503369 (DbSNP)
X 130,532,236 130,532,236 SNP C/G rs2503370 (DbSNP)
X 130,532,530 130,532,530 SNP C/T rs2475424 (DbSNP)
X 130,532,704 130,532,704 SNP G/T rs2475425 (DbSNP)
X 130,532,824 130,532,824 SNP C/T rs17000490 (DbSNP)

Variations - CNVs

Chr Start End Type Sources
CopyNumber 144 (Hasin)
X 130,530,023 130,533,031 Deletion #318 (Waszak)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.