Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR5BR1P Olfactory Receptor

Gene Symbol OR5BR1P1 (View this gene in GeneCards)
Family 5
Subfamily BR
Pseudogene Yes
CORP pseudogene probability score
Aliases OR11-243, HsOR11.13.2P, ORL3623
External Ids HGNC: 15279   GeneBank: BK004789, NG_004196   ORDB: ORL3623   
Build #39 labels OR5BR1P
Chromosomal location 11:59,332,756-59,334,085 (-)
Cluster 11@59a
Synteny CLIC#27
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR5AN2P 76.32% 228

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length

Sequence information

Nucleotide sequence ATGACTGTGGAAAGGAGTAGCATGACAATTACAAAGTTCATTCTCTTGGGATTCTCTGAA
TATTCAAAGACCACTATTTTTCTCTTTTCAGTATTCCTAGGGATATACCTCCTGACCATG
TCCTGAAACGTGAGTCTCATCGCCCTTATCAGGACGGACTCCCATCTACATGCACCTGTG
TACTTTTTCCTTAGTAATCCGTCTTTTCTGGACATCTGCTGTGTTTCCACTATAGCCCCC
AAGATGCCCTCAGACTTTTTCAAGAAGCATAAATTCATTTCCTTTATGGGGTGCACCATG
CAGTACTTCTCTAGCCTGAATGTGACTGAGTGCTGTCTTCTTACAGCCATGGCTTATGAT
TAATATGCTGCCATTTGTGATCCTCTGCTCTACACAGCCATCATGTCACCTGCTCTCTGT
ATGCCAATGGTGGCAGGATCTTGTACAACTGGATACTTTGTCTCATTTATCCAACTCTGT
GCCTTGCTTCTGCTCCATTTCTGTGAGTCAAATAGCAGCCATTTCTTTTGTGACCTGCCC
CAACTGCTGATTCTATCCTGTTCTCATACTGTTTTTTTTTTCTCAAGTCATGACCACTAT
GCTCACAGTAACCTTTATACTCACCTCTATCTTGGTTATCATGATAACTTATGGTTATAT
CATTGCCAACATTCATCTCTTTTATGGGATGCACCATGTAATACTTCTTCTCTAGCCTGG
GTCTGACTGAGTGCTGTCTTCTGGAAGCTATGGCTTATAATTGATATGCTGCCATTTGTG
ACCCTCTGCTCTACATGGCCATCCATGTCCCCAACCTCTGTGTGCACATAATGGTTGGAA
CCTGTATAACTATTATCTTTGGCTCATTTATCCAACTATGTGCTTTGCTTCAGCTCCATT
TCTGTGGGCCAAATAGCAACCATTTCTTCTGTGACCTGCCCCAACTCTTGATCCTATCTT
GCTATGACACCTTTTTCTGTCAAGTCATGACATCCATGCTTACAGTGGTATTTGGACTCA
CATCTGTCTTAGTTATCATGATATTTTATGGCTATGTCATTGCTACCATTCTGAAGATCA
TCTCAGTTGAAGGCAGGTCTAAGGTCTTCAACACTGGTGGTTCTCCCTGATAGCAGTGAC
TCTCTTCTATTGCTCAAGAATCTTTGTCTATATGTGCTCTCACTCTGATGCTTCTCTGAG
TAGAAACAAGGTGGATTCTATTGTATACACTGTGGTGATCCCCAGGTTGAATCCATTGAT
CTACAGCCTGAGTGACAAGTAAATCAAAGATGCCCTAAAGAGATGGACGAAGAGAATATT
CTCCTGGCCT
Conceptual translation MTVERSSMTITKFILLGFSEYSKTTIFLFSVFLGIYLLTMSXVSLIALIRTDSHLHAPV
YFFLSNPSFLDICCVSTIAPKMPSDFFKKHKFISFMGCTMQYFSSLNVTECCLLTAMAYD
XAAICDPLLYTAIMSPALCMPMVAGSCTTGYFVSFIQLCALLLLHFCESNSSHFFCDLP
QLLILSCSHTVFF\QVMTTMLTVTFILTSILVIMITYGYIIANI\SFMGCTMXFFSS
LGLTECCLLEAMAYNXAAICDPLLYMAIHVP/PLCAHNGWNLYNYYLWLIYPT\ALL
QLHFCGPNSNHFFCDLPQLLILSCYDTFFCQVMTSMLTVVFGLTSVLVIMIFYGYVIATI
LKIISVEGRSKVFNTGGS/LIAVTLFYCSRIFVYMCSHSDASLSRNKVDSIVYTVVIPR
LNPLIYSLSDKXKDALKRWTKRIFSWP

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
11 59,100,989 59,100,988 Ins(1) -/A rs67867838 (DbSNP)
11 59,100,979 59,100,978 Ins(1) -/A rs72347079 (DbSNP)
11 59,100,978 59,100,977 Ins(1) -/A rs34645371 (DbSNP)
11 59,100,988 59,100,987 Ins(1) -/A rs71036514 (DbSNP)
11 59,100,987 59,100,986 Ins(1) -/A rs72075856 (DbSNP)
11 59,100,620 59,100,620 SNP A/G rs7107591 (DbSNP)
11 59,101,303 59,101,303 SNP A/G rs73478779 (DbSNP)
11 59,101,176 59,101,176 SNP A/G rs10896962 (DbSNP)
11 59,101,144 59,101,144 SNP C/G rs72921150 (DbSNP)
11 59,101,269 59,101,269 SNP C/G rs56841674 (DbSNP)
11 59,100,666 59,100,666 SNP C/T rs11229922 (DbSNP)
11 59,332,822 59,332,822 SNP G/A 1000GP (CEU, CHBJPT)
11 59,333,147 59,333,147 SNP G/A 1000GP (CEU, CHBJPT)
11 59,333,671 59,333,671 SNP G/C 1000GP (CEU)
11 59,333,703 59,333,703 SNP G/A 1000GP (CEU, CHBJPT)
11 59,333,854 59,333,854 SNP T/C 1000GP (CEU)
11 100 -100 SNP C/T 1000GP (YRI, YRI, YRI, YRI, YRI)

Variations - CNVs

Chr Start End Type Sources
CopyNumber 103 (Hasin)
11 59,098,229 59,101,658 CopyNumber #147 (Waszak)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.