Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR5M7P Olfactory Receptor

Gene Symbol OR5M7P1 (View this gene in GeneCards)
Family 5
Subfamily M
Pseudogene Yes
CORP pseudogene probability score
Aliases OR11-196, OR11-189, HsOR11.11.73P, ORL3510
External Ids HGNC: 14818   GeneBank: AF399359, AF546644-AF546657, BK004645, BK004655, NG_004149   ORDB: ORL3510   
Build #39 labels OR5M7P
Chromosomal location 11:56,500,299-56,501,270 (-)
Cluster 11@56
Synteny CLIC#26
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR5M6P 86.22% 312
OR5M8 89.03% 310

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR5M8 86% 310
Mouse Or5m8 83% 310
Rat Or5m8 82% 310
Cow OR5M8P 75% 302
Orang OR8D4 53% 307
Horse OR5M8 84% 310
Chimp OR5M8 89% 310
Chimp OR5M6 87% 312

Sequence information

Nucleotide sequence ATGAGAAGGAACTTCACGTTGGTGACTGAGTTCATTCTCCTGGGACTGACGAATCACCAG
GAATTACAGATTCTCCTCTTCATGCTGTTTCTGGCCATTTACATGGTCACAGTGGCAGGG
AATCTTAGCATGATTGCCCTCATCCAGGCCAATGCCCGGCTCCACACGCCCATGTACTTT
TTCCTGAGCCACTTATCCTTCCTGGATCTGTGCTTCTCTTCCAATGTGACCCCAAAGATG
CTGGAGATTTTCCTTTCAGAGAAGAAAAGCATTTCCTATCCTGCCTGTCTTGTTCAGTGT
TACCTTTATATCATCTTGGTACACGTTGAGATCTACATCCTGGCTGTGATGGCCTTTGAC
TAGTACATGGCCATCTGAAACCCTCTGCTTTATGGCAGCAAAATGTCCAAAAGTGTGTGT
TCCTTCCTCATCACGGTGCCTTATGTGTATGGAGCGCTCACTGGCCTGATGGAGACCATG
TGGACCTACAACCTAGCCTTCTGTGGCCCCAACGAAATTAATCACTTCTACTGTGCAGAC
CCACCACTGATTAAGCTGGCTTGTTCTGACACCTACAACAAGGAGTTGTCAATGTTTGTT
GTGGCTGGCTGGAATCTTTCGTTTTCTCTCTTCATCATATTTATTTCCTACTTTTACATT
TTTCCTGCTATCTTAAGGATTCGCTCTACAGAGGGCAGGCAAAAAGCTTTTTCTACCTGT
GGCTCCCATCTGACAGCTGTTACTATTTTCTATGCAACTCTGTTCTTCATGTGTCTCAGA
CCTCCATCAGAAGAGTCCATGGAGCAAGGACAAATGGTAGCTGTACTTTATACCACTGTG
ATCCCCATGTTAATCCCATGATCTACAGTCTGAGGAACAAGGATGTGAAAAAGGCTTTAT
CCAAAGAACTGTTCAAAAGAAAATTGTTTCCTAAATAAACATCAGTATTGATTTTTGTCA
TGCTGTCATTTT
Conceptual translation MRRNFTLVTEFILLGLTNHQELQILLFMLFLAIYMVTVAGNLSMIALIQANARLHTPMYF
FLSHLSFLDLCFSSNVTPKMLEIFLSEKKSISYPACLVQCYLYIILVHVEIYILAVMAFD
XMAIXPLLYGSKMSKSVCSFLITVPYVYGALTGLMETMWTYNLAFCGPNEINHFYCAD
PPLIKLACSDTYNKELSMFVVAGWNLSFSLFIIFISYFYIFPAILRIRSTEGRQKAFSTC
GSHLTAVTIFYATLFFMCLRPPSEESMEQGQMVAVLYTTVIPM/NPMIYSLRNKDVKKA
LSKELFKRKLFPK/NIS/XLSCCHF

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
11 56,268,234 56,268,234 SNP A/G rs61902914 (DbSNP)
11 56,268,056 56,268,056 SNP C/T rs61902913 (DbSNP)
11 56,267,823 56,267,823 SNP G/A rs949359 (DbSNP)
11 56,268,114 56,268,114 SNP G/A rs604811 (DbSNP)
11 56,268,433 56,268,433 SNP G/A rs627933 (DbSNP)
11 56,267,880 56,267,880 SNP T/G rs605762 (DbSNP)
11 56,500,347 56,500,347 SNP A/G 1000GP (CEU, CHBJPT)
11 56,500,580 56,500,580 SNP C/T 1000GP (CEU)
11 56,500,638 56,500,638 SNP G/A 1000GP (CEU, CHBJPT)
11 56,500,758 56,500,758 SNP G/A 1000GP (CEU)
11 56,500,957 56,500,957 SNP A/G 1000GP (CEU, CHBJPT)
11 100 -100 SNP A/G 1000GP (YRI, YRI, YRI, YRI)

Variations - CNVs

Chr Start End Type Sources
CopyNumber 186 (Hasin)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.