Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR6D1P Olfactory Receptor

Gene Symbol OR6D1P1 (View this gene in GeneCards)
Family 6
Subfamily D
Pseudogene Yes
CORP pseudogene probability score
Aliases HsOR10.2.1P, ORL3266
External Ids HGNC: 14849   GeneBank: AF399475, NG_004293   ORDB: ORL3266   
Build #39 labels OR6D1P
Chromosomal location 10:45,258,308-45,259,120 (+)
Cluster 10@46
Synteny CLIC#22
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR6C74 47.21% 269
OR6C75 47.94% 267
OR6T1 47.71% 262

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR6D7 78% 270
Mouse Or6d12 72% 271
Rat Or6d13 72% 271
Cow OR6D18 75% 271
Orang OR6D1B 92% 271
Orang OR6D1 92% 271
Horse OR6D23 74% 270
Chimp OR6D1 93% 271

Sequence information

Nucleotide sequence ATGGCAAACATGCTCATAATCACCATCACCTGGGCTGACCATCACCTCCAGACACCTATG
TATTTCTTCCTCAGCAGTTTTTCCTTCTGTGAATGCTGTTTTATCACCACAGTTATTCCT
AAACTTCTGGTCATCTTTCTTTCAGGCAGGCAAATAATCCCCTTTACTACTTGTCTCATG
CAGTCCTTTTCATTTTTATTTCTTGGGTCAACAGTTTTCTTCCTTATGGCTGTGATGTCC
TTGGATTGATACCTGGCCATTTGCAAGCCTCTGCATTACTCCACCATCATGAGCCTGAGG
ACTAGCTTCCACCTGGTCACTGCCTGCTTTGTCGTGGGCTTCACTCTCATCACTGGTCTC
ATGGTGAAGGTTTCCCAGTTATCTTTCTGTGGACCCCATGTCATCCCTCACTTCTTCCGT
GACCTCGGCCCTCTGATCCAACTCTCCTGTTCTGACACCAGATCTACTGAAACGTTGGCC
TTTGTCCTTGTTTCATTCGTTCTTTTTACATCCCTCATTATAACCATCATTGCATATGGC
AACATAGTAGTCACAATTGTACGACTCCCATCAGCCAAGGAGCGGCAGAAAGCTTTCTCC
ACCTGCTCCTCTCACCTCATTGTCCTCTCTCTGGTGTATGGCAGCTGTGTCTTCATATAT
GTGAAGCCGAAGCAAATGGACAGGCTGGACTCCAACAGAAAGGCTGCTCTTGTGAACACA
GTGGTGACCCCACTGCTGAACCCGATCATTTACACTCTGCGGAACAAGCAGGTCCACCAG
GCTCTGAGGGATGCTCAGTCCAGAATGAAATTG
Conceptual translation MANMLIITITWADHHLQTPMYFFLSSFSFCECWFITTVIPKLLVIFLSGRQIIPFTTCLM
QSFSFLFLGSTVFFLMAVMSLDXLAICKPLHYSTIMSLRTSFHLVTACFVVGFTLITGL
MVKVSQLSFCGPHVIPHFFRDLGPLIQLSCSDTRSTETLAFVLVSFVLFTSLIITIIAYG
NIVVTIVRLPSAKERQKAFSTCSSHLIVLSLVYGSCVFIYVKPKQMDRLDSNRKAALVNT
VVTPLLNPIIYTLRNKQVHQALRDAQSRMKL

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
10 100 -100 SNP C/T 1000GP (YRI)
10 45,258,725 45,258,725 SNP C/T 1000GP (CEU, CHBJPT)
10 45,258,781 45,258,781 SNP G/A 1000GP (CHBJPT)
10 45,258,802 45,258,802 SNP A/T 1000GP (CEU)
10 45,258,969 45,258,969 SNP T/C 1000GP (CHBJPT)
10 45,258,973 45,258,973 SNP G/A 1000GP (CEU)
10 45,753,862 45,753,861 Ins(1) -/C rs35818275 (DbSNP)
10 45,754,173 45,754,173 SNP C/T rs1890739 (DbSNP)
10 45,754,449 45,754,448 Ins(1) -/A rs34456142 (DbSNP)

Variations - CNVs

Chr Start End Type Sources
CopyNumber 81 (Hasin)
10 45,550,145 45,820,136 CopyNumber Variation_9148 (DGV)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.