OR7A18P Olfactory Receptor
Gene Symbol | OR7A18P1 (View this gene in GeneCards) |
Family | 7 |
Subfamily | A |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | ORL3787 |
External Ids | HGNC: 15399 GeneBank: NG_002278 ORDB: ORL3787 |
Build #39 labels | OR7A18P |
Chromosomal location | 19:14,886,846-14,887,272 (-) |
Cluster | 19@15a |
Synteny | CLIC#45 |
Remarks | Disrupted by Alu repeat |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR7A10 | 69.66% | 89 |
OR7A2P | 69.66% | 89 |
OR7A5 | 70.79% | 89 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|---|---|---|
Dog | OR7A68 | 55% | 119 |
Mouse | Or7a36 | 52% | 107 |
Rat | Or7a36 | 51% | 107 |
Cow | OR7A10B | 58% | 119 |
Orang | OR7A185P | 88% | 102 |
Horse | OR7A96 | 62% | 107 |
Chimp | OR7A76P | 93% | 106 |
Sequence information
Nucleotide sequence |
GATGTCCCTGAGTATAATAAAGCAGACGTGGAAGGACACTCATGCAATCTCCTCCCCGTG TGGACCCCTGGAAGCAGGTGTCCCTTCATGATCACAAATTTCTGTCTCCGAGAAGCAAGG CATGTCCTTTCCCAAGAAACTTTTCCAGAATCACAAACTTTTCCTACTCTTTGCAGGGAT GAATGTATTTCTGCAGACTGTGATGGCCTATGACCACTTTGTGGCCATCTGTCACCCCCT GCACTACAGGGTCATCATGAATCCTGGGATCTTTGGACTGTGGGTTCTGGTGTCCTGGAG CATGAGTGCCCTGAATTCCTCACTGCAAAGCAGAATGTGTTGCAGCTGTCCTTCTGCACA AACTTGGAAATCCCCCCATTTTTTTCTGTGAACTTAATCAGTTGATCCTGCTTGCCTGTT CTAACAC |
Conceptual translation |
DVPEYNKADVEGHSCNL\PCGPLEAGVPSXQISVSEKQGMSFPKKLFQNHKLFLLFAG MNVFLQTVMAYDHFVAICHPLHYRVIMNPGIFGLWVLVSWSMSALNSSLQSR/VLQLSF CTNLEIP/IFFCELNQLILLACSN Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
19 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI) | |
19 | 14,887,095 | 14,887,095 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
19 | 14,997,870 | 14,997,870 | SNP | A/G | rs73508597 (DbSNP) | |
19 | 14,997,907 | 14,997,907 | SNP | C/T | rs10409376 (DbSNP) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.