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(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR7A18P Olfactory Receptor

Gene Symbol OR7A18P1 (View this gene in GeneCards)
Family 7
Subfamily A
Pseudogene Yes
CORP pseudogene probability score
Aliases ORL3787
External Ids HGNC: 15399   GeneBank: NG_002278   ORDB: ORL3787   
Build #39 labels OR7A18P
Chromosomal location 19:14,886,846-14,887,272 (-)
Cluster 19@15a
Synteny CLIC#45
Remarks Disrupted by Alu repeat

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR7A10 69.66% 89
OR7A2P 69.66% 89
OR7A5 70.79% 89

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR7A68 55% 119
Mouse Or7a36 52% 107
Rat Or7a36 51% 107
Cow OR7A10B 58% 119
Orang OR7A185P 88% 102
Horse OR7A96 62% 107
Chimp OR7A76P 93% 106

Sequence information

Nucleotide sequence GATGTCCCTGAGTATAATAAAGCAGACGTGGAAGGACACTCATGCAATCTCCTCCCCGTG
TGGACCCCTGGAAGCAGGTGTCCCTTCATGATCACAAATTTCTGTCTCCGAGAAGCAAGG
CATGTCCTTTCCCAAGAAACTTTTCCAGAATCACAAACTTTTCCTACTCTTTGCAGGGAT
GAATGTATTTCTGCAGACTGTGATGGCCTATGACCACTTTGTGGCCATCTGTCACCCCCT
GCACTACAGGGTCATCATGAATCCTGGGATCTTTGGACTGTGGGTTCTGGTGTCCTGGAG
CATGAGTGCCCTGAATTCCTCACTGCAAAGCAGAATGTGTTGCAGCTGTCCTTCTGCACA
AACTTGGAAATCCCCCCATTTTTTTCTGTGAACTTAATCAGTTGATCCTGCTTGCCTGTT
CTAACAC
Conceptual translation DVPEYNKADVEGHSCNL\PCGPLEAGVPSXQISVSEKQGMSFPKKLFQNHKLFLLFAG
MNVFLQTVMAYDHFVAICHPLHYRVIMNPGIFGLWVLVSWSMSALNSSLQSR/VLQLSF
CTNLEIP/IFFCELNQLILLACSN

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
19 100 -100 SNP C/T 1000GP (YRI, YRI, YRI)
19 14,887,095 14,887,095 SNP C/T 1000GP (CEU, CHBJPT)
19 14,997,870 14,997,870 SNP A/G rs73508597 (DbSNP)
19 14,997,907 14,997,907 SNP C/T rs10409376 (DbSNP)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.