Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR7A3P Olfactory Receptor

Gene Symbol OR7A3P1 (View this gene in GeneCards)
Family 7
Subfamily A
Pseudogene Yes
CORP pseudogene probability score
Aliases OR14-11, OR14-59, OR14-12, OR11-7b, OR19-12, HsOR19.3.8P, ORL3582
External Ids HGNC: 8366   GeneBank: AF065859, AF399430, AF399431, NG_002170, U86224, U86225, U86227   ORDB: ORL3582   
Build #39 labels OR7A12P, OR7A14P, OR7A3P
Chromosomal location 19:14,903,242-14,904,173 (-)
Cluster 19@15a
Synteny CLIC#45
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR7A10 76.95% 308
OR7A17 79.55% 308
OR7A1P 75.58% 303

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR7A56 76% 303
Mouse Or7a36 72% 303
Rat Or7a41 74% 303
Cow OR7A96 78% 302
Orang OR7A3 91% 303
Horse OR7A96 79% 302
Chimp OR7A10 77% 309

Expression evidences

Source Accession
GNF Atlas2 gnf1h03307_at

Sequence information

Nucleotide sequence ATGGAACCAGAGAATGGTACGAGGATTTTAGGATTTCTTCTTCTGGGACTTTCAGAGGAA
CCAGAATTGCAGCCCGTTATGTTTGGACTCTTCCTCTCCATGTATCTGACAACTGTGTTT
GGAAACCTGCTCATCATCCTGGCCATCTGCTCTGGTTCCCACCTCCACACCCCCATGTAC
TTCTTCCTCTCTAACCTGTCCTTTGTAGACATCTGTGTTACCTCCACCACAGTCCCAAAG
ACACTGTCAAACATCCGGACACAGAGTAAAGTCATCACCTATGCAGGTTGCATCACCCAG
ATGTACTTTTTTGTACTCTTTATAGTGTTGGACAGCTTACTCTTGACCGTGATGGCCTAT
GACCAGTTTGTGGCCATCTGTCACCCCCTGCACTACACGGTCATCGTGAACCCTCGGCTC
TGTGGACTGCTGGTTCTGGCGTCCTGGATCATGAGTGCCCTGAATTCCTTGATAGAAAGC
TTAATGGTGTTGCCACTGCTCTTTTGTACAGACTTGAAAATCCCCCACTTTTTCTGTGAA
CTTAATCAGATAATCCGCAGTGCCTGTTCTGACACCTTTCTTAATGACATGGTGATGTAT
TTGTCAGCTGTGCTTCTAGGTAGGGGATGTTTCACTGGGATCCTGTACTCTTACTTTAAG
ACAGTTTCCTCCATACGTGCAATCTCATCAGCTCAGGGGAAGTACAAGGCATTTTCCACC
TGTGCATCGCACCTCTCAGTTGTCTCCTTATTTTATTGTATGAGCCTTGGGGTGTACCTT
AGTGCTGCTGCAACCCACAACTCACTCTCAAGTGCAACAGCCTCTGATGTACACTGTGGT
CACCCCCATGCTGAACCCCTTCATCTACAGTCTGAGGAATAAAGACATAAAGGGGGCTCT
AAAACAATTCTTCAGAAGGAAGAAATAAAATG
Conceptual translation MEPENGTRILGFLLLGLSEEPELQPVMFGLFLSMYLTTVFGNLLIILAICSGSHLHTPMY
FFLSNLSFVDICVTSTTVPKTLSNIRTQSKVITYAGCITQMYFFVLFIVLDSLLLTVMAY
DQFVAICHPLHYTVIVNPRLCGLLVLASWIMSALNSLIESLMVLPLLFCTDLKIPHFFCE
LNQIIRSACSDTFLNDMVMYLSAVLLGRGCFTGILYSYFKTVSSIRAISSAQGKYKAFST
CASHLSVVSLFYCMSLGVYLSAAATHNSLSSATAS\YTVVTPMLNPFIYSLRNKDIKGA
LKQ\SEGRNKM

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
19 100 -100 SNP T/C 1000GP (YRI, YRI, YRI, YRI, YRI)
19 14,903,377 14,903,377 SNP T/C 1000GP (CEU)
19 14,903,390 14,903,390 SNP C/A 1000GP (CEU)
19 14,903,417 14,903,417 SNP A/C 1000GP (CEU)
19 14,903,424 14,903,424 SNP T/C 1000GP (CEU)
19 14,903,623 14,903,623 SNP A/G 1000GP (CHBJPT)
19 14,903,716 14,903,716 SNP G/A 1000GP (CEU)
19 14,903,907 14,903,907 SNP A/G 1000GP (CEU, CHBJPT)
19 15,014,153 15,014,153 SNP A/T rs11882391 (DbSNP)
19 15,014,162 15,014,161 Ins(2) -/CT rs35639269 (DbSNP)
19 15,014,189 15,014,189 SNP C/T rs3897851 (DbSNP)
19 15,014,194 15,014,194 SNP G/T rs4575643 (DbSNP)
19 15,014,202 15,014,202 SNP A/C rs4128487 (DbSNP)
19 15,014,236 15,014,236 SNP C/T rs11672922 (DbSNP)
19 15,014,613 15,014,613 SNP C/T rs10416804 (DbSNP)
19 15,014,719 15,014,719 SNP G/A rs4134457 (DbSNP)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.