Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR7E128P Olfactory Receptor

Gene Symbol OR7E128P1 (View this gene in GeneCards)
Family 7
Subfamily E
Pseudogene Yes
CORP pseudogene probability score
Aliases HsOR11.15.3P, ORL3644
External Ids HGNC: 15305   GeneBank: AB065704, AB065749, NG_004186   ORDB: ORL3644   
Build #39 labels OR7E128P
Chromosomal location 11:71,893,407-71,894,438 (+)
Cluster 11@72
Synteny CLIC#0
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR7E129P 91.81% 342
OR7E1P 90.06% 342
OR7E86P 90.32% 341

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR7E24 66% 331
Mouse Or7e178 63% 310
Rat Or7e173 58% 310
Cow OR7E186 64% 329
Orang OR7E103P 88% 307
Orang OR7E163P 87% 299
Orang OR7E111P 85% 299
Horse OR7E225 68% 318
Chimp OR7E163MP 88% 320
Chimp OR7E163BP 87% 320
Chimp OR7E161P 87% 320

Expression evidences

Source Accession
ESTs H49406

Sequence information

Nucleotide sequence CTGGTTTTTATCTTTTATTTTTCCAATCCTCTTTCCTTCTCAAGGTGTCCAAGACACACA
GAGCCACGGAATCTCACAAGTGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCA
GAACTGCAGCCGCTCCTCGCTTTGCTGTCCCTGTCCCTGTCCATGCATCTGGTCATGGTG
CTGAGGAACCTGCTCAACATCCTGGCTGTCAGCTCTGACTCCCCCCTCCACACCCCCACG
TACTTCTTCCTCTCCAACCTGTGCTGGGCTGACACCGGTTTCACCTCGGCCACGGTTCCC
AATATGATTGTGGACATGCAGTCGCATAGCAGAGTCATCTCTCATGCGGACTGCCTGACA
CAGATTTCCTTCTTGCTCCTTTTTGCATGTATAGAAGGCATGCTCCTGACTGTGATGACC
TATGACTGCTTTGTAGCCATCTGTTGCCCTCTGCACTACCCAGTCATCGTGAATCCTCAC
CTCTGTGTCTTCTTCGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCTGCAC
AGTTGGATTGTGTTACAATTCACCATCATCAAGAATGTGGAAATCTCTAATTCTGTCTGT
GACCCCTCTCAACTTCTCAAACTTGCTTGTTCTGACAGCGTCATCAATAGCATATTCATG
CATTTCCATAATACTATGTTTGGTTTTCTTCCCATTTCAGGGATCCTTGTGTCTTACTAT
AAAATCGTCCCCTCCATTCTTAGGATTTCATCGTCAGATGGGAAGTATAAAGCCTTCTCC
ACCTGTGGCTCTCACCTAGCAGTTGTTTGCTGATTTTATGGAACAGGCATTGGCGTGTAC
TTGACTTCAGCTCTGTCACCACCCCCCAGGAATGGTGTGATGGCGTCAGTGATGTACGCT
GTGGTCACCCCCATGCTGAACCTTTTCATCTACAGCCTGAGAAACAGGGACATACAAAGT
GCCCTGTGGAGGCTGCTCAGCAGAACAGTCGAATCTCATGATCTGTTCCATCCTTTTTCT
TGTGTGGGTAAG
Conceptual translation LVFIFYFSNPLSFSRCPRHTEPRNLTSVXFLLLGLSEDPELQPLLALLSLSLSMHLVMV
LRNLLNILAVSSDSPLHTPTYFFLSNLCWADTGFTSATVPNMIVDMQSHSRVISHADCLT
QISFLLLFACIEGMLLTVMTYDCFVAICCPLHYPVIVNPHLCVFFVLVSFFLSLLDSQLH
SWIVLQFTIIKNVEISNSVCDPSQLLKLACSDSVINSIFMHFHNTMFGFLPISGILVSYY
KIVPSILRISSSDGKYKAFSTCGSHLAVVCXYGTGIGVYLTSALSPPPRNGVMASVMYA
VVTPMLNLFIYSLRNRDIQSALWRLLSRTVESHDLFHPFSCVGK

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
11 71,604,591 71,604,591 SNP A/G rs11235398 (DbSNP)
11 71,605,332 71,605,332 SNP A/G rs475959 (DbSNP)
11 71,604,754 71,604,754 SNP A/G rs12295215 (DbSNP)
11 71,604,784 71,604,784 SNP C/G rs12274833 (DbSNP)
11 71,604,727 71,604,727 SNP C/T rs526054 (DbSNP)
11 71,604,564 71,604,564 SNP G/T rs12803431 (DbSNP)
11 71,894,025 71,894,025 SNP A/C 1000GP (CEU, CHBJPT)
11 71,894,077 71,894,077 SNP A/G 1000GP (CEU)
11 71,894,286 71,894,286 SNP A/G 1000GP (CEU)
11 100 -100 SNP G/C 1000GP (YRI, YRI, YRI, YRI)

Variations - CNVs

Chr Start End Type Sources
11 71,363,639 71,657,576 CopyNumber Variation_3857 (DGV)
11 71,292,416 71,613,954 CopyNumber Variation_85847 (DGV)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.

AceView Gene Models

The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.

Accession Type Chr Start End Strand
OR7E128P.aApr07-unspliced main_exon 5UTR chr11 71,893,352 71,893,407 +
CDS_partial chr11 71,893,407 71,893,784 +