Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR7E12P Olfactory Receptor

Gene Symbol OR7E12P1 (View this gene in GeneCards)
Family 7
Subfamily E
Pseudogene Yes
CORP pseudogene probability score
Aliases OR11-3, AC000378-A, hg1058, HsOR11.2.1P, ORL3650
External Ids HGNC: 8383   GeneBank: AF065854, AF399383, NG_002179   ORDB: ORL3650   
Build #39 labels OR7E12P
Chromosomal location 11:3,390,810-3,391,749 (-)
Cluster 11@3
Synteny CLIC#0
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR7E11P 91.8% 317
OR7E59P 90.62% 320
OR7E84P 89.06% 320

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR7E153 73% 305
Mouse Or7e178 66% 311
Rat Or7e173 67% 306
Cow OR7E186 70% 308
Orang OR7E53P 87% 312
Orang OR7E14P 86% 314
Orang OR7E84BP 86% 315
Horse OR7E225 71% 306
Chimp OR7E36P 88% 314
Chimp OR7E59P 87% 317
Chimp OR7E38P 87% 314

Expression evidences

Source Accession
ESTs EC516607
GNF Atlas2 216698_x_at

Sequence information

Nucleotide sequence AATGATACAGACCCACAGAGTCTAACAGATGTCTCTATATTCCTCCTCCTCAAACTCTCA
GAGGATCCAGAACTGCAGCAGGTCGTCGCTGGGCTGTTCCTGTCCATGTGCCTGGTCACG
GTGCTGGGGAACCTACTCATCATCCTGGCCGTCAGCCCTGACTCCCACCTCCACACCCCC
ATGTACTTGTTCCTCTCCAACCTGTCCTTGCCTGACATCGGTTTCACCTCCACCACGGTC
CCCAAGATGATTGTGGACATCCAGTCTCACAGCAGAGTCATCTCCTATGCAGGCTGCCTG
ACTCAGATGTCTCTCTTTGCCATTTTTGGAGGTATGGAAGAGAGACATGCTCCTGAGTGT
GATGGCCTATGACCGGTTTGTAGCCATCTGTCACCCTCTATATTGTTCAGCCATCTTTAA
CCCGTGTTTCTGTGGCTTCCTAGATTTGTTGTCTTTTTTTTTTTTTTTCTCAGTCTTTCA
GACTCCCAGCTGCACAACTTGATTGCCTTACAAATGACCTGCTTCAAGGATGTGGAAATT
CCTAATTTCTTCTGGGAACCTTCTCAACTCTCCCATCTTGCATGTTGTGACACCTTCACC
AGGAACATCAGTATTTCCCTGCTGCCATATTTGGTTTTCTTCCCATCTTGGGGACCCTTT
TCTCTTACTGTAAAATTGTTTCCTCCATTCTGAGGGTTTCATCATCAGGTGGGAAGTATA
AACCTTCTCCACCTGTGGGTCTCACCTGTCAGTTGTTTGCTGATTTTATGGAACAGGCAT
TGGAGGGTACCTCGGTTCAGATGTGTCATCTTCCCCGAGAAAGGGTGCAGTGGCCTCAGT
GATGTACATGGTGGTCACCCCCATGCTGAACCCCTTCATCTACAGCCTGAGAAACAGGGA
TATGAAAAGTGTCCTGCGGCGGCCGCATGGCAGCACAGTC
Conceptual translation NDTDPQSLTDVSIFLLLKLSEDPELQQVVAGLFLSMCLVTVLGNLLIILAVSPDSHLHTP
MYLFLSNLSLPDIGFTSTTVPKMIVDIQSHSRVISYAGCLTQMSLFAIFGGMEE\MLLS
VMAYDRFVAICHPLYCSAIFNPCFCGFL\CCLFFFF\SLSDSQLHNLIALQMTCFKDV
EIPNFFWEPSQLSHLACCDTFTRNI/YFPAAIFGFLPILGTLFSYCKIVSSILRVSSSG
GKYK/FSTCGSHLSVVCXYGTGIGGYLGSDVSSSPRKGAVASVMYMVVTPMLNPFIYS
LRNRDMKSVLRRPHGSTV

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
11 3,412,591 3,412,591 SNP A/T rs3890867 (DbSNP)
11 3,412,641 3,412,641 SNP T/G rs2005656 (DbSNP)
11 3,412,642 3,412,642 SNP T/G rs2005655 (DbSNP)

Variations - CNVs

Chr Start End Type Sources
CopyNumber 155 (Hasin)
11 3,236,512 3,801,429 CopyNumber Variation_3833 (DGV)
11 3,405,664 3,472,159 CopyNumber Variation_85618 (DGV)
11 3,405,664 3,622,881 CopyNumber Variation_85617 (DGV)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.