Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR7E23P Olfactory Receptor

Gene Symbol OR7E23P1 (View this gene in GeneCards)
Family 7
Subfamily E
Pseudogene Yes
CORP pseudogene probability score
Aliases OR21-3, HsOR21.2.1P, ORL3801
External Ids HGNC: 8395   GeneBank: AF399396, NG_004368   ORDB: ORL3801   
Build #39 labels OR7E92P, OR7E23P
Chromosomal location 21:32,621,061-32,622,043 (+)
Cluster 21@34
Synteny CLIC#0
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR7E109P 90.26% 308
OR7E31P 88.22% 314
OR7E36P 87.73% 326

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR7E24 70% 322
Mouse Or7e177 65% 318
Rat Or7e173 64% 310
Cow OR7E186 67% 323
Orang OR7E15P 87% 319
Orang OR7E14P 86% 319
Horse OR7E225 69% 318
Chimp OR7E36P 86% 322
Chimp OR7E14P 87% 319
Chimp OR7E38P 84% 320
Chimp OR7E33P 84% 315

Sequence information

Nucleotide sequence TTTCAACCCTCTTTTCTAAGCAAAAGATGTCCAAACTATACAGACCCACAGAATCTAACA
GATGTCTTTATATTCCTCCTCCTAGAACTCTCAGAGGATCCAGCACTGCAGCTGGTCGTC
ACTGGGCTGTGCCTGTGTGCCTGGTCACGGTGCTGTGGAACCTGCTCAGCATCCTGGCCG
TCAGCCCTGACTCCCACCTCCACACCCCCATGCACTTCTTCCTCTGCAACCTGTCCTTGC
CTGACATCGGTTTCACCTCCACCACGGTCCCCAAGATGATCGTGGACATCCAATCTCACA
GCAGAGTCATCTCCTATGCAGGCTGCCTGACTCAGATGTCTCTCTCTGCCATTTTTGGAG
GCATGGAAGAGAGACATGCTCCTGAGTGTGATGGCCTATGACCAGTTTGTAGCCATCTGT
CACCCTCTGTATCATTCAGCCATCATGAACCCGTGTTTCTGTGGCTTCCTGGTTTTGTTG
TCTTTTTTTTTCTCAGTCTTTTAGACTCCCAGCTGCAAAACTTGATCGCCTTACAAATCA
CCTGCTTCAAGGATGTGGAAATTCCTAATTTCTTCTGTGACCCTTCTCAACTCCCCCATC
TTGCATGTTGTGACACCTTCACCAATAACATTATCATGTATTTCCCTGCTGCCATATTTG
GTTTTCTTCCCATCTCGGGGACCCTTTTCTCTTACTATAAAATTGTTTCCTCCATTCTGA
GGGTTTCATCATCAGGTGGGAGCTATAAAGCCTTCGCCACCTGTGGATCTCACCTGTCAG
TTGTTTGCTGATTTTATGGAACAGGCGTTGGAGGGTACCTCAGTTCAGATGTGTCGTCTT
CCCTGAGAAAGCGTGCAGTGGCCTCAGTGATGTACACAGTGGTCACCCCCATGCTGAATC
CCTTGATCTACAGCCTGAGAAACAGGGATATTAAAGGTGTCCTGTGGCAGCCGTGCAGCC
GCACGGCAGCACAGTCTCATCTC
Conceptual translation FQPSFLSKRCPNYTDPQNLTDVFIFLLLELSEDPALQLVVTGLCL/CLVTVLWNLLSIL
AVSPDSHLHTPMHFFLCNLSLPDIGFTSTTVPKMIVDIQSHSRVISYAGCLTQMSLSAIF
GGMEE\MLLSVMAYDQFVAICHPLYHSAIMNPCFCGFLVLL/FFFLSLLDSQLQNLIA
LQITCFKDVEIPNFFCDPSQLPHLACCDTFTNNIIMYFPAAIFGFLPISGTLFSYYKIVS
SILRVSSSGGSYKAFATCGSHLSVVCXYGTGVGGYLSSDVSSSLRKRAVASVMYTVVTP
MLNPLIYSLRNRDIKGVLWQPCSRTAAQSHL

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
21 100 -100 SNP G/T 1000GP (YRI, YRI)
21 32,621,113 32,621,113 SNP A/G 1000GP (CEU)
21 32,621,229 32,621,229 SNP G/T 1000GP (CEU)
21 32,621,938 32,621,938 SNP A/G 1000GP (CEU)
21 33,993,459 33,993,459 SNP C/T rs73194261 (DbSNP)
21 33,993,539 33,993,539 SNP G/T rs7278846 (DbSNP)
21 33,993,861 33,993,861 SNP C/T rs73361319 (DbSNP)
21 33,994,017 33,994,016 Ins(1) -/C rs34664978 (DbSNP)
21 33,994,187 33,994,187 SNP A/T rs2006852 (DbSNP)
21 33,994,248 33,994,248 SNP A/G rs701729 (DbSNP)

Variations - CNVs

Chr Start End Type Sources
CopyNumber 50 (Hasin)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.