Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR7E83P Olfactory Receptor

Gene Symbol OR7E83P1 (View this gene in GeneCards)
Family 7
Subfamily E
Pseudogene Yes
CORP pseudogene probability score
Aliases HsOR4.2.4P, ORL3118
External Ids HGNC: 14688   GeneBank: NG_002251   ORDB: ORL3118   
Build #39 labels OR7E134P, OR7E83P
Chromosomal location 4:9,512,869-9,513,893 (+)
Cluster 4@9
Synteny CLIC#0
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR7E129P 90.64% 342
OR7E87P 90.88% 340
OR7E99P 91.23% 342

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR7E24 64% 331
Mouse Or7e178 61% 310
Rat Or7e173 58% 310
Cow OR7E186 62% 326
Orang OR7E103P 90% 307
Orang OR7E163P 89% 299
Orang OR7E103BP 88% 301
Horse OR7E225 66% 318
Chimp OR7E163P 88% 320
Chimp OR7E161P 88% 320
Chimp OR7E163MP 87% 320
Chimp OR7E115P 86% 320

Expression evidences

Source Accession
ESTs BG202648

Sequence information

Nucleotide sequence CTGGTTTTTATCGTTTATTTTTCCAATCCTCTTTCCTTCTCAAGGTGTCCAAGACACACA
GAGCCACGGAATCTCACAGATGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCA
GAACTGCAACCGGTCCTCGCTTTGCTCTCCCTGTCCCTGTCCATGTATCTGGTCACGGTG
ATGAGGAACCTGCTCAGCATCCTGACTGTCAGCTCTGTCTCTCCCCTCCACACCCCCATG
TACTTCTTCCTCTCCAACCTGTGCTGGGCTGACATCGGTTTCACCTCGGCCACGGTTCCC
ACGATGATTGTGGACATGCAGTCGCATAGCAGAGTCATCCCTCATGCGGGCTGCCTGACG
CAGATGTATTTCTTGGTCTTTTTTGCATGTATAGAAGGCATGCTCCTGACTGTGATGGCC
TATGACTGCTTTGTAGCCATCTGTCGCCCTCTGCACTACCCAGTCATCGTGAATCCTCAC
CTCTGTGTCTTCTTCGTTTTGGTGTCCTTTTTTCTTAGCCTGTTGGATTCCCAGCTGCAC
AGTTGAATTGTGTTACAATTCAACATCATCAAGAATGTGGAAATCTCTAATTTTGTCTGT
GACCCCTCTCAACTTCTCAAACTTGCCTGTTCTGACAGCGTCATCAATATCATTTTCATA
TATTTCGATAGTACTATGTTTGCTTTTCTTCCCATTTCAGGGATCCTATGGCTTACTATA
AAATCGTCCCCTCCATTCTAAGGATTTCATCGTCAGATGGGAAGTATAAAGCCTTGTCCA
CCTGTGCCTCTCACCTAGCAGTTGTTTGCTGATTTGATGGAACAGGCATTGGCATGTACC
TGACTTCAGCTGTGTCACCACCCCCCAGGAATGGTGTGGTGGCGTCAGTGATGTACGCTG
TGGTCACCCCCATGCTGAACCTTTTCATCTATAGCCTGAGAAACAGGAACATACAAAGTG
CCCTGCGGAGGCTGCGCAGCAGAACAGTCGAATCTCATGATCTGTTCCATCGTTTTTCTT
GTGTG
Conceptual translation LVFIVYFSNPLSFSRCPRHTEPRNLTDVXFLLLGLSEDPELQPVLALLSLSLSMYLVTV
MRNLLSILTVSSVSPLHTPMYFFLSNLCWADIGFTSATVPTMIVDMQSHSRVIPHAGCLT
QMYFLVFFACIEGMLLTVMAYDCFVAICRPLHYPVIVNPHLCVFFVLVSFFLSLLDSQLH
SXVLQFNIIKNVEISNFVCDPSQLLKLACSDSVINIIFIYFDSTMFAFLPISGIL/AY
YKIVPSILRISSSDGKYKALSTCASHLAVVCXDGTGIGMYLTSAVSPPPRNGVVASVMY
AVVTPMLNLFIYSLRNRNIQSALRRLRSRTVESHDLFHRFSCV

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
4 9,515,159 9,515,158 Ins(1) -/C rs34468422 (DbSNP)
4 9,514,619 9,514,618 Ins(1) -/G rs35236357 (DbSNP)
4 9,514,585 9,514,584 Ins(1) -/G rs34756375 (DbSNP)
4 9,514,819 9,514,819 SNP A/C rs13108939 (DbSNP)
4 9,515,293 9,515,293 SNP C/G rs7689849 (DbSNP)
4 9,515,121 9,515,121 SNP C/T rs13109658 (DbSNP)
4 9,514,668 9,514,668 SNP C/T rs13108672 (DbSNP)
4 9,514,776 9,514,776 SNP C/T rs34056993 (DbSNP)
4 9,515,174 9,515,174 SNP C/T rs12499381 (DbSNP)
4 9,515,537 9,515,537 SNP G/T rs12501954 (DbSNP)
4 9,515,288 9,515,288 SNP G/T rs7689839 (DbSNP)
4 9,513,525 9,513,525 SNP C/T 1000GP (CEU, CHBJPT)
4 9,513,569 9,513,569 SNP G/C 1000GP (CEU, CHBJPT)
4 9,513,570 9,513,570 SNP G/A 1000GP (CEU, CHBJPT)
4 9,512,881 9,512,881 SNP G/A 1000GP (CHBJPT)
4 100 -100 SNP G/A 1000GP (YRI, YRI, YRI, YRI, YRI, YRI)

Variations - CNVs

Chr Start End Type Sources
4 8,707,676 9,852,717 InversionBreakpoint Variation_0347 (DGV)
4 9,400,938 9,594,059 CopyNumber Variation_0699 (DGV), Variation_2069 (DGV)
4 8,705,921 9,811,805 CopyNumber Variation_2497 (DGV)
4 8,522,173 10,273,779 CopyNumber Variation_3479 (DGV)
4 9,371,116 9,719,981 CopyNumber Variation_9470 (DGV)
4 9,381,818 9,681,651 CopyNumber Variation_34433 (DGV)
4 9,480,235 9,586,764 CopyNumber Variation_37604 (DGV)
4 9,371,116 9,573,740 CopyNumber Variation_51486 (DGV)
4 9,371,116 9,599,790 CopyNumber Variation_53853 (DGV)
4 9,508,396 9,745,703 CopyNumber Variation_63744 (DGV), Variation_63745 (DGV)
4 9,514,418 9,517,542 Deletion #265 (Waszak)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.