Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR7E89P Olfactory Receptor

Gene Symbol OR7E89P1 (View this gene in GeneCards)
Family 7
Subfamily E
Pseudogene Yes
CORP pseudogene probability score
Aliases HsOR2.3.1P, ORL3083
External Ids HGNC: 14730   GeneBank: AF399404, NG_002272   ORDB: ORL3083   
Build #39 labels OR7E89P
Chromosomal location 2:158,853,550-158,854,573 (+)
Cluster 2@160
Synteny CLIC#0
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
90.35% 342
OR7E129P 91.52% 342
OR7E99P 90.94% 342

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR7E24 66% 331
Mouse Or7e178 63% 310
Rat Or7e173 59% 310
Cow OR7E186 65% 329
Orang OR7E103P 90% 307
Orang OR7E103BP 88% 301
Orang OR7E163P 89% 299
Horse OR7E225 68% 318
Chimp OR7E163P 89% 320
Chimp OR7E161P 88% 320
Chimp OR7E115P 87% 320

Expression evidences

Source Accession
ESTs DA417123

Sequence information

Nucleotide sequence CTGGTTTTTATCTTTTATTTTTCCAATCCTCTTTCCTTCTCAAGGTGTCCAAGACACACG
GAGCCACGGAATCTCACAGGTGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGATCCA
GAACTGCTGCCGGTCCTCGCTTTGCTGTCCCTGTCCCTGTCCATGTATCTGGTCATGGTG
CTGAGGAACCTGCTCAGCATCCTGGCTGTCAGCTCTGACTCCCCTCCACACCCCCGTGTA
CTTCTTCCTCTCCAACCTGTGCTGGGCTGACATCGGTTTCACCTCGCCCACGGTTCCCAA
GATGATTGTGGACATGCAGTCGCATAGCAGAGTCATCTCTCATGCGGGCTGCCTGGCACA
GATGTCTTTCTTGGTCCTTTTTGCATGTATAGAAGACATGCTCCTGACTGTGATGGCCTA
TGACAGCTTTGTAGCCATCTGTCACCCTCTGCACTACCCAGTCATCATGAATCCTCACCT
CTGTGTCTTCTTCGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCTGCACGG
TTGGATTGTGTTACAATTCACCATCATCAAGAATGTGGAAATCTCTAATTTTCTCTGTGA
CCCCTCTCAACTTCTCAAACTTGCCTGTTCTGACAGCGTCACCAATAGCATATTCATATA
TTTTGATAGTACTATGTTTGGTTTTCTTCCCATTTCAGGGATCCTTTTGTCTTAGTATAA
AATTGTCCCCTCCATTCTAAGGATGTCATCGTCAGATGGGAAGTATAAAGCCTTCACCAC
CTGTGGCTCTCACCTAGCAGTTGTTTGCTGATTTGATGGAACAGGCATTGGCATGTACCT
GACTTCAGCTCTGTCACCACCCCCCAGGAATGGTGTGGCGGCGTCAGTGATGTACGCTGT
GGTCACCCCCATGCTGAACCTTTTCATCTACAGCCTGAGAAACAGGGACATACAAAGTGC
CCTGCGGAGGCTGCGCAGCAGAACAGTGGAATCTCATGATCTGTTCCATCCTTTTTCTTG
TGTG
Conceptual translation LVFIFYFSNPLSFSRCPRHTEPRNLTGVXFLLLGLSEDPELLPVLALLSLSLSMYLVMV
LRNLLSILAVSSD\LHTPVYFFLSNLCWADIGFTSPTVPKMIVDMQSHSRVISHAGCLA
QMSFLVLFACIEDMLLTVMAYDSFVAICHPLHYPVIMNPHLCVFFVLVSFFLSLLDSQLH
GWIVLQFTIIKNVEISNFLCDPSQLLKLACSDSVTNSIFIYFDSTMFGFLPISGILLSX
KIVPSILRMSSSDGKYKAFTTCGSHLAVVCXDGTGIGMYLTSALSPPPRNGVAASVMYA
VVTPMLNLFIYSLRNRDIQSALRRLRSRTVESHDLFHPFSCV

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
2 159,710,769 159,710,769 Del(1) -/T rs35104871 (DbSNP)
2 159,710,850 159,710,849 Ins(1) -/A rs36061318 (DbSNP)
2 159,711,009 159,711,008 Ins(1) -/G rs35767644 (DbSNP)
2 159,710,981 159,710,981 SNP A/C rs59737258 (DbSNP)
2 159,710,189 159,710,189 SNP A/T rs9750235 (DbSNP)
2 158,853,677 158,853,677 SNP T/A 1000GP (CEU)
2 158,854,400 158,854,400 SNP C/G 1000GP (CEU)

Variations - CNVs

Chr Start End Type Sources
2 159,710,696 159,730,096 CopyNumber Variation_38893 (DGV)
2 159,651,734 159,953,466 CopyNumber Variation_53156 (DGV)
2 159,706,274 159,747,664 CopyNumber Variation_68193 (DGV)
2 159,709,962 159,713,085 Deletion #188 (Waszak)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.

AceView Gene Models

The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.

Accession Type Chr Start End Strand
OR7E89PandOR7E28P.bApr07 exon_5UTR chr2 158,795,318 158,795,430 +
main_exon CDS_partial chr2 158,853,594 158,853,782 +