OR8I1P Olfactory Receptor
Gene Symbol | OR8I1P1 (View this gene in GeneCards) |
Family | 8 |
Subfamily | I |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | OR11-176, HsOR11.11.58P, ORL3512 |
External Ids | HGNC: 14828 GeneBank: AF399351, BK004767, NG_004147 ORDB: ORL3512 |
Build #39 labels | OR8I1P |
Chromosomal location | 11:56,296,540-56,297,470 (-) |
Cluster | 11@56 |
Synteny | CLIC#26 |
Remarks |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR8I2 | 82.2% | 309 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|---|---|---|
Dog | OR8I2P | 81% | 307 |
Mouse | Or8i2 | 77% | 304 |
Rat | Or8i2 | 77% | 306 |
Cow | OR8I2 | 77% | 309 |
Orang | OR5E1P | 49% | 308 |
Horse | OR8I2 | 78% | 309 |
Chimp | OR8I2 | 81% | 309 |
Sequence information
Nucleotide sequence |
TTGATATAAACAGCTGGCAGCAATTTCACTGAGGTGACTGTCTTCATCCTCTCTGGATAT GCAAATCACCCTGAATTACAAGTCAGTTTTTTCTTGATGTTTCTCTTCATTTATCTATTC ACTATTTTGGGAAACCTGGGACTGATCATGTTAATCAGAATGGATTCTCAGCTTCACACC CCTATGTACTTTTTCCTCAGCAATTTAGCATTCATTGACATATTTTACTCCTCTTCCGTA ACACCTAAGACATTGGCGAATTTCCAATCCAATCAGAGATCCATCTCCTTTGTTGGCTGC TTTGTTCAAATGTACTTTTCTGTTGGATTGGTGTGTACTGAGTGTTTCCTGCTGGGATCA ATGGCCTATGATTGCTATGTAGCAATCTGGAATCCCTCATTCAGTAGTCATTTCTTAGAA AGCGTGCAACTGGCTGGGAGTAATGTCATACACGATAGGTTTCACAAATTCTCTGGTATC TGTCTGTGTGATAAGTGGTTTTGTTCTGTGATTCCAGCATCAATCTTTTTTTTCTGTGAC ACCACAGCTCTTTTAGCACTGTCCTGTGTAGATGCATTCAGCACAGAAATGGTGAGCTTT GCCTTAGCTGGATTCACTCTTCTTGGCTCTATCCTTATCATCACAGTCACTTATATCGCC ATCACCTCAGCCATCCTGAAGAACCAGTGGGCAGCAGGATGGCAGAAGGCCTTCTCCACC TGCGCATTCCACCTCATGGGTTAACTATCTTCTATGGGTCCCTGATTTTCACCTATTTGC AACTGGATAAAACATCATCCCTGATCCACGCACAGTTGGCATTTGTATTCTATATGACTG TCATTCCCATGCTGAATCCACTCATCTAGAGTCTGAGGAACAAAGATGTAAAAAATGCTC TTTGAGAGTCATACATAGAAAACTTTTTCCA |
Conceptual translation |
LIXAGSNFTEVTVFILSGYANHPELQVSFFLMFLFIYLFTILGNLGLIMLIRMDSQLHT PMYFFLSNLAFIDIFYSSSVTPKTLANFQSNQRSISFVGCFVQMYFSVGLVCTECFLLGS MAYDCYVAIWNP\SVVISXACNWLGVMSYTIGFTNSLVSVCVI\VLFCDSSIN\FF CDTTALLALSCVDAFSTEMVSFALAGFTLLGSILIITVTYIAITSAILKNQWAAGWQKAF STCAFHL/GLTIFYGSLIFTYLQLDKTSSLIHAQLAFVFYMTVIPMLNPLIXLRNKDV KNAL/RVIHRKLFP Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
11 | 56,064,163 | 56,064,163 | SNP | A/G | rs17613241 (DbSNP) | |
11 | 56,064,088 | 56,064,088 | SNP | G/A | rs61736205 (DbSNP) | |
11 | 56,064,316 | 56,064,316 | SNP | G/T | rs17541133 (DbSNP) | |
11 | 56,296,687 | 56,296,687 | SNP | A/G | 1000GP (CEU) | |
11 | 56,296,840 | 56,296,840 | SNP | T/G | 1000GP (CEU) | |
11 | 56,296,995 | 56,296,995 | SNP | C/T | 1000GP (CEU) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.