Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR8Q1P Olfactory Receptor

Gene Symbol OR8Q1P1 (View this gene in GeneCards)
Family 8
Subfamily Q
Pseudogene Yes
CORP pseudogene probability score
Aliases HsOR11.18.43P, ORL3643
External Ids HGNC: 15317   GeneBank: NG_004182   ORDB: ORL3643   
Build #39 labels OR8Q1P
Chromosomal location 11:124,601,602-124,602,258 (+)
Cluster 11@124
Synteny CLIC#29
Remarks Disrupted by LTR repeat

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR8A1 45.27% 243
OR8A2P 42.19% 237
OR8G5 38.11% 244

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR8A1 45% 243
Mouse Or8a1b 41% 243
Rat Or8a1b 41% 243
Cow OR8A1F 44% 243
Orang OR8Q2P 65% 224
Horse OR8A1I 44% 243
Chimp OR8A1 43% 243

Sequence information

Nucleotide sequence ATGGCAGCAGAAAGTCACTCTACGGTGACAGAGTTCATTCTCAGGAAAAAGCCAGCAAGG
GCTCCAGCTCCCCCTCTTCTAGGGATCTGTTTGAAAACCGTAGTGGGGGCCCTCATCTTG
ATCACTCTAGTTTTCCTTAATTCTCAGCTTCACCCTCCCATGTACTACGTCATCAGAAAT
TTATCATTTATGGATCACTGCAATTGCTCTATTAGTACCCCTAAAATACTGGTGAAGTTT
GTGTTAGAGAAGACCATCATCTCCTATGAGGACGGCATGTCACAGCTTTGTAGTGCTTCG
TGTTTATATTGTCATGGCCAAGCGTAACATGCGGACCAGCAACTGCTGTCATCACATTTC
ATCAAGTCAGCTCCCTGCTGGTAGTTGTAGTATTTATATGGAGTTGACTGGTACAACAAT
AGATATTTTGCCTTGTATTAAAATAGTACTAGTGTGAGTTATTCATCAGTCATACTTCTC
TCATGCACTAGCATCTATGATATTGATAGGACAATTTTCTTTTTTACTTGATGCAATATT
GTAGTCACTAGATTAACAGTTGTTTCCTACTCCTTTTCTCTCCAGCATCCTCCACATCAG
CTTTACAAAGGGCAAGCTCTGGGTTTTTCCCGTAGGTCTGACGCATTCATGCTGTTG
Conceptual translation MAAESHSTVTEFILRKK\QGLQLPLFX/CLKTVVGALILITLVFLNSQLHPPMYYVI
RNLSFMDHCNCSISTPKILVKFVLEKTIISYEDGMSQLCSA/VFILSWPSVTCGPATAV
ITFHQVSSLLVVVVFIWSXVQQXFCLVLKXXEL\SVILLSCTSIYDIDRTIFFFT
XNIVVTRLTVVSY/L/LSSILHISFTKGKLWVFPVGLTHSC

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
11 124,471,840 124,471,839 Ins(1) -/C rs34070831 (DbSNP)
11 124,472,139 124,472,139 SNP A/C rs11820079 (DbSNP)
11 124,472,006 124,472,006 SNP A/G rs11820076 (DbSNP)
11 124,471,997 124,471,997 SNP A/G rs11219730 (DbSNP)
11 124,471,503 124,471,503 SNP A/T rs73622435 (DbSNP)
11 124,602,243 124,602,243 SNP C/T 1000GP (CHBJPT)
11 100 -100 SNP A/T 1000GP (YRI, YRI, YRI)

Variations - CNVs

Chr Start End Type Sources
CopyNumber 13 (Hasin)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.