Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR8V1P Olfactory Receptor

Gene Symbol OR8V1P1 (View this gene in GeneCards)
Family 8
Subfamily V
Pseudogene Yes
CORP pseudogene probability score
Aliases OR11-267, HsOR11.11.52P
External Ids HGNC: 19613   GeneBank: BK004819, NG_004299   
Build #39 labels OR8V1P
Chromosomal location 11:56,188,331-56,189,287 (-)
Cluster 11@56
Synteny CLIC#26
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR8K3 74.19% 310

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length

Sequence information

Nucleotide sequence ATGGACAAACACAATCTGACAGTAGTGAATGAATTCATTCTAATGGGAATCACGGACATC
TCTGAGCTGCAGGCTCCATTATTTGGGTTCTCCCTCATTGTATACATGTTGTCAGTGGTG
GGTAACTTAGGCTTGATCATCCTCACAAAGATAGATTCTAGGCTTCAAACACCCATGTAC
TTTTTCCTAAGGCATCTGGCTTTCATTGATCTTGGTTATTCAACAGCAGTGGGACCCAAA
ATGCTAGTAAACTTTGTTGTAGATCAACATATAATCTCCTATAATTAGTGTGCTACCCAA
CTCACTTTCTTCAGTATATTTATCAGTAGTGAAATTTTCATTCTGTCAGCAATGGCCTAT
GAACGCTATGTGGCCATTTGTAACCCTCTGCTCTATATGATCATCATGTCACAAAGGGCA
TGTCAAATTCTAGTGGCAATACCTTATCTCTACAGTGTCTTTTTGACTTTGCTGACAGTC
ACAAAAATGTTTACCTCATCATTTTGTGGCTATAACATCATCAAGCATTTCTACTGTGAT
AGTCTGCCATTGATATCTTTGCTCTGTTCAGACACAGAAGACATTAAATTGATAATTTTA
ATCTTTTCAGCTTTTAATTTGATTTCATCTCTTCTGATAGTCCTTGTGTCTTACATTCTG
ATCCTTGTCGCCGTCCTCAGGATGAATTCTGCAGAAGGCAGGTACAAGGCCTTCTCCACC
TGTGGAACTCACCTGACAGTGATAACTGTATTTTATGGCACCTTCTTCTTTATGTATGTT
CACCCCAAATCCAGTCATTCACTTGATATTGACAAAATGGCCTCTTTATTTTATACTTTG
ATAACACCTATGTTGAATCCAATGATCTACAGTTTGAGGAATAAAGAGATAAAAAATGCT
CTACGTAGAACCTGGAAAATATGTGCAAATCATCTATTTAAAATTCATTGTAGGTTA
Conceptual translation MDKHNLTVVNEFILMGITDISELQAPLFGFSLIVYMLSVVGNLGLIILTKIDSRLQTPMY
FFLRHLAFIDLGYSTAVGPKMLVNFVVDQHIISYNXATQLTFFSIFISSEIFILSAMAY
ERYVAICNPLLYMIIMSQRACQILVAIPYLYSVFLTLLTVTKMFTSSFCGYNIIKHFYCD
SLPLISLLCSDTEDIKLIILIFSAFNLISSLLIVLVSYILILVAVLRMNSAEGRYKAFST
CGTHLTVITVFYGTFFFMYVHPKSSHSLDIDKMASLFYTLITPMLNPMIYSLRNKEIKNA
LRRTWKICANHLFKIHCRL

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
11 100 -100 SNP G/C 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI)
11 55,956,018 55,956,018 SNP A/G rs59168428 (DbSNP)
11 55,956,040 55,956,040 SNP C/T rs17150144 (DbSNP)
11 55,956,401 55,956,401 SNP G/T rs4320968 (DbSNP)
11 55,956,489 55,956,488 Ins(1) -/C rs35601611 (DbSNP)
11 56,188,542 56,188,542 SNP G/A 1000GP (CEU, CHBJPT)
11 56,188,925 56,188,925 SNP T/G 1000GP (CEU, CHBJPT)

Variations - CNVs

Chr Start End Type Sources
11 55,953,807 55,956,863 Deletion #221 (Waszak)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.