OR10AK1P Olfactory Receptor
| Gene Symbol | OR10AK1P1 (View this gene in GeneCards) |
| Family | 10 |
| Subfamily | AK |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | |
| External Ids | HGNC: 31236 GeneBank: NG_004402 |
| Build #39 labels | |
| Chromosomal location | 11:55,957,215-55,957,629 (-) |
| Cluster | 11@56 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR10A6 | 40.8% | 125 |
| OR10AG1 | 46.46% | 127 |
| OR2A14 | 41.73% | 127 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR10AG64 | 65% | 128 |
| Mouse | Or12e1 | 57% | 125 |
| Rat | Or12e1 | 58% | 127 |
| Cow | OR10AG64 | 58% | 128 |
| Orang | OR2A14 | 40% | 127 |
| Horse | OR10AG93 | 57% | 127 |
| Chimp | OR10AG1P | 47% | 116 |
Sequence information
| Nucleotide sequence |
TGACTCTTATTTAAAAAAAATAACTTATGTGACATCCCCTCAATACTCAACGCTGGCCTG TGGAGATACTTTTGTGAATGAGATGTTGCTCTTTACAGATGTTGTGCTGTTTGCTATGAA CTCTTTTATGATGATACTTGGCTACTACAGGAAAATCATCTTCACCATCTTGAAGTCTCC ATCAGAAACAGGACAAGTCATAGGCTCCTCCACCTGCTCATCTCATGTCATAGTTGTGGC TTTATTCTGTAGATCCAGAATCATTACATACATATGACCTAAATCCAAACATTCTTCCAT AAGATGCAAATTTTTATCTCTTTTCTATATCATTGTCAACTCAGTGTTTAACCTCATGAT CTACAATGTGAGGAAGAGATTAAAAATGGCTTTGTGAAAATTCCTGCCTATTTAA |
| Conceptual translation |
FKKNNLCDIPSIL\LACGDTFVNEMLLFTDVVLFAMNSFMMILGYYRKIIFTILKSPSE TGQVIGSSTCSSHVIVVALFCRSRIITYIXKSKHSSIRCKFLSLFYIIVNSVFNLMIYN VRKRLKMALXFLPI Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 55,725,055 | 55,725,055 | SNP | A/G | rs10792426 (DbSNP) | |
| 11 | 55,725,097 | 55,725,097 | SNP | G/T | rs17514608 (DbSNP) | |
| 11 | 55,957,579 | 55,957,579 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 55,957,621 | 55,957,621 | SNP | T/G | 1000GP (CEU) | |
| 11 | 100 | -100 | SNP | G/A | 1000GP (YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 55,153,930 | 55,816,828 | CopyNumber | Variation_0308 (DGV) |
| 11 | 55,710,709 | 55,787,839 | CopyNumber | Variation_1245 (DGV) |
| 11 | 55,689,863 | 55,849,156 | CopyNumber | Variation_2927 (DGV) |
| 11 | 54,835,623 | 55,879,426 | CopyNumber | Variation_8690 (DGV) |
| 11 | 55,685,799 | 55,842,512 | CopyNumber | Variation_9189 (DGV) |
| 11 | 55,685,556 | 55,819,544 | CopyNumber | Variation_29912 (DGV), Variation_48846 (DGV) |
| 11 | 55,685,556 | 55,796,170 | CopyNumber | Variation_48845 (DGV) |
| 11 | 55,685,556 | 55,836,620 | CopyNumber | Variation_48847 (DGV) |
| 11 | 55,704,822 | 55,729,751 | CopyNumber | Variation_53105 (DGV) |
| 11 | 55,683,109 | 55,833,490 | CopyNumber | Variation_85786 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.