OR10G1P Olfactory Receptor
| Gene Symbol | OR10G1P1 (View this gene in GeneCards) |
| Family | 10 |
| Subfamily | G |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR14-39, AE000658-C, HsOR14.2.3P, ORL3718 |
| External Ids | HGNC: 8169 GeneBank: BK004669, NG_002200 ORDB: ORL3718 |
| Build #39 labels | OR10G1P |
| Chromosomal location | 14:21,601,885-21,602,825 (-) |
| Cluster | 14@22b |
| Synteny | CLIC#35 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR10G2 | 93.87% | 310 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR10G6 | 62% | 305 |
| Mouse | Or10g1 | 90% | 311 |
| Mouse | Or10g1b | 89% | 311 |
| Rat | Or10g1 | 89% | 312 |
| Rat | Or10g1b | 89% | 313 |
| Cow | OR10G1 | 91% | 312 |
| Cow | OR10G1C | 90% | 312 |
| Orang | OR10G1E | 91% | 311 |
| Orang | OR10G1D | 91% | 311 |
| Horse | OR10G1 | 92% | 312 |
| Horse | OR10G1G | 91% | 312 |
| Chimp | OR10G1 | 96% | 314 |
| Chimp | OR10G1C | 95% | 314 |
Expression evidences
| Source | Accession |
|---|---|
| GNF Atlas2 | gnf1h01791_x_at |
Sequence information
| Nucleotide sequence |
ATGGGAAAGACCAAAAACACATCGCTGGACACTGTGGTGAGAGATTTCATTCTTCTGGGT TTGTCTCACCCCCCGAATATAAGAAGCCTCCTCTTCCTGGTCTTCTTCGTCATTTACATC CTCACTCAGCTGGGGAACCTGCTCATTCTGCTCACCGTGTGGGCTGACCCGAAGCTCCGT GCTCGCCCCATGTACATTCTTCTGGGAGTGCTCTCATTCCTGGACATGTGGCTCTCCTCA GTCATCGTTCCTTGAATTATTTTAAACTTCACTCCTGCCAACAAGGCTATCCCGTTTGGT GGCTGTGTGGCTCAACTGTATTTCTTTCACTTCCTGGGCAGCACCCAGTGCTTCCTCTAC ACCTTGATGGCCTATGACAGGTACCTGGCAATATGTCAGCCCCTGCGCTACCCAGTGCTC ATGAATGGGAGGTTATGCACAGTCCTTGTGGCTGGAGCTTGGGTCGCCGGCTCCATGCAT GGGTCTATCCAGGCCACCCTGACCTTCCGCCTGCCCTACTGTGGGCCCAATCAGGTAGAT TACTTTATCTGTGACATCCCCGCAGTATTGAGACTGGCCTGTGCTGACACAACTGTCAAT GAGCTTGTGACCTTTGTGGACATCGGGGTAGTGGCCGCCAGTTGCTTCATGTTAATTCTG CTCTCGTATGCCAACATAGTAAATGCCATCCTGAAGATACGCACCACTGATGGGAGGCGC CGGGCCTTCTCCACCTGTGGCTCCCACCTAATCGTGGTCACAGTCTACTATGTCCCCTGT ATTTTCATCTACCTTAGGGCTGGCTCCAAAGGCCCCCTGGATGGGGCAGCGGCTGTGTTT TACACTGTTGTCACTCCATTACTGAACCCCCTCATCTATACACTGAGGAACCAGGAAGTG AAGTCTGCCCTGAAGAGGATAACAGCAGGTCAAGGGACTGAA |
| Conceptual translation |
MGKTKNTSLDTVVRDFILLGLSHPPNIRSLLFLVFFVIYILTQLGNLLILLTVWADPKLR ARPMYILLGVLSFLDMWLSSVIVPXILNFTPANKAIPFGGCVAQLYFFHFLGSTQCFLY TLMAYDRYLAICQPLRYPVLMNGRLCTVLVAGAWVAGSMHGSIQATLTFRLPYCGPNQVD YFICDIPAVLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVNAILKIRTTDGRR RAFSTCGSHLIVVTVYYVPCIFIYLRAGSKGPLDGAAAVFYTVVTPLLNPLIYTLRNQEV KSALKRITAGQGTE Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 14 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
| 14 | 21,602,290 | 21,602,290 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 14 | 21,602,556 | 21,602,556 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 14 | 21,602,747 | 21,602,747 | SNP | T/G | 1000GP (CEU, CHBJPT) | |
| 14 | 21,602,793 | 21,602,793 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 14 | 22,070,146 | 22,070,146 | SNP | C/T | rs10134340 (DbSNP) | |
| 14 | 22,070,256 | 22,070,256 | SNP | A/G | rs12432621 (DbSNP) | |
| 14 | 22,070,509 | 22,070,509 | SNP | A/G | rs11157069 (DbSNP) | |
| 14 | 22,070,590 | 22,070,590 | SNP | C/T | rs72686068 (DbSNP) | |
| 14 | 22,070,596 | 22,070,596 | Del(1) | -/C | rs67642368 (DbSNP) | |
| 14 | 22,070,597 | 22,070,597 | Del(1) | -/C | rs35103338 (DbSNP) | |
| 14 | 22,070,707 | 22,070,707 | SNP | A/G | rs12432738 (DbSNP) | |
| 14 | 22,070,723 | 22,070,723 | rescued_nonsense | A/C | rs72686069 (DbSNP) | |
| 14 | 22,070,820 | 22,070,820 | SNP | C/T | rs57699851 (DbSNP) | |
| 14 | 22,070,898 | 22,070,898 | SNP | G/T | rs12897308 (DbSNP) | |
| 14 | 22,070,944 | 22,070,944 | SNP | A/G | rs12893117 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 14 | 21,931,624 | 22,169,502 | CopyNumber | Variation_5318 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.