Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR10G1P Olfactory Receptor

Gene Symbol OR10G1P1 (View this gene in GeneCards)
Family 10
Subfamily G
Pseudogene Yes
CORP pseudogene probability score
Aliases OR14-39, AE000658-C, HsOR14.2.3P, ORL3718
External Ids HGNC: 8169   GeneBank: BK004669, NG_002200   ORDB: ORL3718   
Build #39 labels OR10G1P
Chromosomal location 14:21,601,885-21,602,825 (-)
Cluster 14@22b
Synteny CLIC#35
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR10G2 93.87% 310

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR10G6 62% 305
Mouse Or10g1 90% 311
Mouse Or10g1b 89% 311
Rat Or10g1 89% 312
Rat Or10g1b 89% 313
Cow OR10G1 91% 312
Cow OR10G1C 90% 312
Orang OR10G1E 91% 311
Orang OR10G1D 91% 311
Horse OR10G1 92% 312
Horse OR10G1G 91% 312
Chimp OR10G1 96% 314
Chimp OR10G1C 95% 314

Expression evidences

Source Accession
GNF Atlas2 gnf1h01791_x_at

Sequence information

Nucleotide sequence ATGGGAAAGACCAAAAACACATCGCTGGACACTGTGGTGAGAGATTTCATTCTTCTGGGT
TTGTCTCACCCCCCGAATATAAGAAGCCTCCTCTTCCTGGTCTTCTTCGTCATTTACATC
CTCACTCAGCTGGGGAACCTGCTCATTCTGCTCACCGTGTGGGCTGACCCGAAGCTCCGT
GCTCGCCCCATGTACATTCTTCTGGGAGTGCTCTCATTCCTGGACATGTGGCTCTCCTCA
GTCATCGTTCCTTGAATTATTTTAAACTTCACTCCTGCCAACAAGGCTATCCCGTTTGGT
GGCTGTGTGGCTCAACTGTATTTCTTTCACTTCCTGGGCAGCACCCAGTGCTTCCTCTAC
ACCTTGATGGCCTATGACAGGTACCTGGCAATATGTCAGCCCCTGCGCTACCCAGTGCTC
ATGAATGGGAGGTTATGCACAGTCCTTGTGGCTGGAGCTTGGGTCGCCGGCTCCATGCAT
GGGTCTATCCAGGCCACCCTGACCTTCCGCCTGCCCTACTGTGGGCCCAATCAGGTAGAT
TACTTTATCTGTGACATCCCCGCAGTATTGAGACTGGCCTGTGCTGACACAACTGTCAAT
GAGCTTGTGACCTTTGTGGACATCGGGGTAGTGGCCGCCAGTTGCTTCATGTTAATTCTG
CTCTCGTATGCCAACATAGTAAATGCCATCCTGAAGATACGCACCACTGATGGGAGGCGC
CGGGCCTTCTCCACCTGTGGCTCCCACCTAATCGTGGTCACAGTCTACTATGTCCCCTGT
ATTTTCATCTACCTTAGGGCTGGCTCCAAAGGCCCCCTGGATGGGGCAGCGGCTGTGTTT
TACACTGTTGTCACTCCATTACTGAACCCCCTCATCTATACACTGAGGAACCAGGAAGTG
AAGTCTGCCCTGAAGAGGATAACAGCAGGTCAAGGGACTGAA
Conceptual translation MGKTKNTSLDTVVRDFILLGLSHPPNIRSLLFLVFFVIYILTQLGNLLILLTVWADPKLR
ARPMYILLGVLSFLDMWLSSVIVPXILNFTPANKAIPFGGCVAQLYFFHFLGSTQCFLY
TLMAYDRYLAICQPLRYPVLMNGRLCTVLVAGAWVAGSMHGSIQATLTFRLPYCGPNQVD
YFICDIPAVLRLACADTTVNELVTFVDIGVVAASCFMLILLSYANIVNAILKIRTTDGRR
RAFSTCGSHLIVVTVYYVPCIFIYLRAGSKGPLDGAAAVFYTVVTPLLNPLIYTLRNQEV
KSALKRITAGQGTE

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
14 100 -100 SNP G/A 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI)
14 21,602,290 21,602,290 SNP T/C 1000GP (CEU, CHBJPT)
14 21,602,556 21,602,556 SNP G/A 1000GP (CEU, CHBJPT)
14 21,602,747 21,602,747 SNP T/G 1000GP (CEU, CHBJPT)
14 21,602,793 21,602,793 SNP A/G 1000GP (CEU, CHBJPT)
14 22,070,146 22,070,146 SNP C/T rs10134340 (DbSNP)
14 22,070,256 22,070,256 SNP A/G rs12432621 (DbSNP)
14 22,070,509 22,070,509 SNP A/G rs11157069 (DbSNP)
14 22,070,590 22,070,590 SNP C/T rs72686068 (DbSNP)
14 22,070,596 22,070,596 Del(1) -/C rs67642368 (DbSNP)
14 22,070,597 22,070,597 Del(1) -/C rs35103338 (DbSNP)
14 22,070,707 22,070,707 SNP A/G rs12432738 (DbSNP)
14 22,070,723 22,070,723 rescued_nonsense A/C rs72686069 (DbSNP)
14 22,070,820 22,070,820 SNP C/T rs57699851 (DbSNP)
14 22,070,898 22,070,898 SNP G/T rs12897308 (DbSNP)
14 22,070,944 22,070,944 SNP A/G rs12893117 (DbSNP)

Variations - CNVs

Chr Start End Type Sources
14 21,931,624 22,169,502 CopyNumber Variation_5318 (DGV)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.