OR10J7P Olfactory Receptor
| Gene Symbol | OR10J7P1 (View this gene in GeneCards) |
| Family | 10 |
| Subfamily | J |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR1.4.22P |
| External Ids | HGNC: 19637 GeneBank: NG_004365 |
| Build #39 labels | OR10J7P |
| Chromosomal location | 1:159,351,051-159,352,023 (+) |
| Cluster | 1@159b |
| Synteny | CLIC#4 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR10J1 | 65.91% | 308 |
| OR10J2P | 63.46% | 312 |
| OR10J8P | 64.61% | 308 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR10J7 | 85% | 307 |
| Mouse | Or10j7 | 82% | 310 |
| Rat | Or10j7 | 82% | 310 |
| Cow | OR10J2 | 65% | 307 |
| Orang | OR10J1P | 65% | 308 |
| Horse | OR10J7 | 85% | 310 |
| Chimp | OR10J7 | 91% | 298 |
Sequence information
| Nucleotide sequence |
TGTTGTGGACTTTGTCTTATTCTTTCAGACCTGAGATTCTCAATGAAGAGAGCCAATCAC ACAGAGTTAAGAGAGTTTGTTTTCCAAGGTTTCTCCAATTTTCCAGAACATCAGCTCACA TTTTTTGTGGTCTTTCTCGCCCTCTACATTCCTAACTCTGGCTGGCAATTTCATCATTCT GGCCATAATCTATGTTGACCATCACCTCCATACTCCTATGTACTTCTTTTTAAGTGTGCT ATCCACTTCAGAGACTTTCTATTCCCTGGTCATTATCCCACGCATGCTTTCCAGCCTTGT AGGCCTGAGCCAATCCATTTCCCTGGAGGGCTGTGGGACTCAGATCTTTTTTTTTCTTGG CTTTGCCATCACCAACTGCCTCCTGCTAGCAGTAATGGAATATGATCACTACGTGGCCGT CTGCAACCCACTTCGATACTCAGTCATCATGAATTGGAGGGTGTGTGCTATACTGGCATC ATCAGTCTGTGCCACAGGGTTCTCACTCTCACTGGTTCAGACTGTGGCCATTTTCAGGTT GCTCTTTTGCACCCCACTGATTGAGCATTTCTTCTGTGATGTTCAGCCTGTGTTGGACCT GGCCTGGGCTACCCCAATGATCAATGATATTCTGACCTTAATTATGAGCCTCCTTGCCAT CACAGCCCCAGCCATCTTCCTCTTCATCTCTTATGTCCTTATTATTTCCACCATTCTCAA GATCACCTCAGCTGAAGGCGGGAAGAAGACCTTTGCCACCTATGCATCCCACCTCACTGT GGTCATTATCCACTATGGCTGTGCCTCCATTGCCTACTTCAAGCCCAATTTGGAGAATAC CAAAGATCAGGATCAGTTAATCTCAGTGACCTACACTGTCATAACACCTTTACTAAACCC TGTTGTGTATGGTCTGAGAAATAAAGAAGTCCAGGATGCTCTGCAGAGAGTGCTGGGTAG GAAATTCTTCTCC |
| Conceptual translation |
CCGLCLILSDLRFSMKRANHTELREFVFQGFSNFPEHQLTFFVVFLALYI\TLAGNFII LAIIYVDHHLHTPMYFFLSVLSTSETFYSLVIIPRMLSSLVGLSQSISLEGCGTQIFFFL GFAITNCLLLAVMEYDHYVAVCNPLRYSVIMNWRVCAILASSVCATGFSLSLVQTVAIFR LLFCTPLIEHFFCDVQPVLDLAWATPMINDILTLIMSLLAITAPAIFLFISYVLIISTIL KITSAEGGKKTFATYASHLTVVIIHYGCASIAYFKPNLENTKDQDQLISVTYTVITPLLN PVVYGLRNKEVQDALQRVLGRKFFS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 1 | 159,321,186 | 159,321,185 | Ins(1) | -/G | rs35110849 (DbSNP) | |
| 1 | 159,320,979 | 159,320,979 | SNP | A/G | rs10908710 (DbSNP) | |
| 1 | 159,321,589 | 159,321,589 | SNP | A/G | rs58650325 (DbSNP) | |
| 1 | 159,321,259 | 159,321,259 | SNP | A/G | rs10908711 (DbSNP) | |
| 1 | 159,321,675 | 159,321,675 | SNP | G/T | rs4443888 (DbSNP) | |
| 1 | 159,321,174 | 159,321,174 | SNP | G/T | rs28602261 (DbSNP) | |
| 1 | 159,351,189 | 159,351,189 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 1 | 159,351,469 | 159,351,469 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 1 | 159,351,547 | 159,351,547 | SNP | G/A | 1000GP (CEU) | |
| 1 | 159,351,885 | 159,351,885 | SNP | G/T | 1000GP (CEU, CHBJPT) | |
| 1 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 1 | 159,320,741 | 159,323,813 | CopyNumber | #105 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.