OR10P1 Olfactory Receptor
| Gene Symbol | OR10P11 (View this gene in GeneCards) |
| Family | 10 |
| Subfamily | P |
| Pseudogene | No |
| CORP pseudogene probability score | 0.09 (functional) |
| Aliases | OR12-7, HsOR12.5.26 |
| External Ids | HGNC: 15378 GeneBank: AB065867, AF399489, BK004259, NM_206899 |
| Build #39 labels | OR10P1P, OR10P2P, OR10P3P |
| Chromosomal location | 12:55,636,892-55,637,830 (+) |
| Cluster | 12@56 |
| Synteny | CLIC#31 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR10A4 | 49.84% | 309 |
| OR10A7 | 48.22% | 309 |
| OR10C1 | 51.46% | 309 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR10P24P | 78% | 313 |
| Mouse | Or10p1 | 85% | 311 |
| Rat | Or10p1 | 82% | 305 |
| Cow | OR10P25 | 60% | 311 |
| Orang | OR10P1P | 96% | 313 |
| Horse | OR10P22P | 60% | 308 |
| Chimp | OR10P1P | 98% | 314 |
Expression evidences
| Source | Accession |
|---|---|
| mRNA | AB529283 |
Sequence information
| Nucleotide sequence |
ATGGCTGGGGAAAACCATACTACACTGCCTGAATTCCTCCTTCTGGGATTCTCTGACCTC AAGGCCCTGCAGGGCCCCCTGTTCTGGGTGGTGCTTCTGGTCTACCTGGTCACCTTGCTG GGTAACTCCCTGATCATCCTCCTCACACAGGTCAGCCCTGCCCTGCACTCCCCCATGTAC TTCTTCCTGCGCCAACTCTCAGTGGTGGAGCTCTTCTACACCACTGACATCGTGCCCAGG ACCCTGGCCAATCTGGGCTCCCCGCATCCCCAGGCCATCTCTTTCCAGGGCTGTGCAGCC CAGATGTACGTCTTCATTGTCCTGGGCATCTCGGAGTGCTGCCTGCTCACGGCCATGGCC TATGACCGATATGTTGCCATCTGCCAGCCCCTACGCTATTCCACCCTCTTGAGCCCACGG GCCTGCATGGCCATGGTGGGTACCTCCTGGCTCACAGGCATCATCACGGCCACCACCCAT GCCTCCCTCATCTTCTCTCTACCTTTTCGCAGCCACCCGATCATCCCGCACTTTCTCTGT GACATCCTGCCAGTACTGAGGCTGGCAAGTGCTGGGAAGCACAGGAGCGAGATCTCCGTG ATGACAGCCACCATAGTCTTCATTATGATCCCCTTCTCTCTGATTGTCACCTCTTACATC CGCATCCTGGGTGCCATCCTAGCAATGGCCTCCACCCAGAGCCGCCGCAAGGTCTTCTCC ACCTGCTCCTCCCATCTGCTCGTGGTCTCTCTCTTCTTTGGAACAGCCAGCATCACCTAC ATCCGGCCGCAGGCAGGCTCCTCTGTTACCACAGACCGCGTCCTCAGTCTCTTCTACACA GTCATCACACCCATGCTCAACCCCATCATCTACACCCTTCGGAACAAGGACGTGAGGAGG GCCCTGCGACACTTGGTGAAGAGGCAGCGCCCCTCACCC |
| Conceptual translation |
MAGENHTTLPEFLLLGFSDLKALQGPLFWVVLLVYLVTLLGNSLIILLTQVSPALHSPMY FFLRQLSVVELFYTTDIVPRTLANLGSPHPQAISFQGCAAQMYVFIVLGISECCLLTAMA YDRYVAICQPLRYSTLLSPRACMAMVGTSWLTGIITATTHASLIFSLPFRSHPIIPHFLC DILPVLRLASAGKHRSEISVMTATIVFIMIPFSLIVTSYIRILGAILAMASTQSRRKVFS TCSSHLLVVSLFFGTASITYIRPQAGSSVTTDRVLSLFYTVITPMLNPIIYTLRNKDVRR ALRHLVKRQRPSP Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 12 | 56,031,273 | 56,031,273 | NS | A/G | M/V | rs7970885 (DbSNP) |
| 12 | 56,030,814 | 56,030,814 | NS | C/G | L/V | rs12231050 (DbSNP) |
| 12 | 56,030,938 | 56,030,938 | NS | C/T | P/L | rs10876838 (DbSNP) |
| 12 | 56,031,611 | 56,031,611 | SYN | A/G | S/S | rs11171631 (DbSNP) |
| 12 | 56,030,921 | 56,030,921 | SYN | A/G | L/L | rs7305623 (DbSNP) |
| 12 | 55,637,154 | 55,637,154 | NS | C/T | P/L | 1000GP (CEU, CHBJPT) |
| 12 | 55,637,489 | 55,637,489 | NS | G/A | V/M | 1000GP (CEU, CHBJPT) |
| 12 | 55,637,827 | 55,637,827 | SYN | A/G | S/S | 1000GP (CEU, CHBJPT) |
| 12 | 55,637,782 | 55,637,782 | SYN | C/T | D/D | 1000GP (CHBJPT) |
| 12 | 100 | -100 | SYN | A/G | Q/Q | 1000GP (YRI, YRI, YRI, YRI) |
| 12 | 100 | -100 | NS | C/T | P/L | 1000GP (YRI, YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
| P88L | R140W | V200M | I215F | R262Q | % Freq | CORP | |
|---|---|---|---|---|---|---|---|
| 1 | P | R | V | I | R | 67.82 | 0.248 |
| 2 | L | R | M | I | R | 30.18 | 0.248 |
| 3 | P | R | V | F | R | 1.15 | 0.248 |
| 4 | P | R | V | I | Q | 0.38 | 0.248 |
| 5 | P | R | M | I | R | 0.31 | 0.248 |
| 6 | L | R | V | I | R | 0.08 | 0.248 |
| 7 | P | W | M | I | R | 0.08 | 0.248 |
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR10P1.aApr07-unspliced | main_exon | CDS | chr12 | 55,636,892 | 55,637,830 | + |
| 3UTR | chr12 | 55,637,830 | 55,637,833 | + | ||