OR10V2P Olfactory Receptor
| Gene Symbol | OR10V2P1 (View this gene in GeneCards) |
| Family | 10 |
| Subfamily | V |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-255, HsOR11.13.15P, ORL3631 |
| External Ids | HGNC: 15137 GeneBank: BK004575, NG_004248 ORDB: ORL3631 |
| Build #39 labels | OR10V2P |
| Chromosomal location | 11:59,748,811-59,749,574 (+) |
| Cluster | 11@59b |
| Synteny | CLIC#27 |
| Remarks | Disrupted by Alu repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR10V1 | 62.4% | 250 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR10V5 | 82% | 250 |
| Mouse | Or10v9 | 79% | 254 |
| Rat | Or10v9b | 78% | 254 |
| Cow | OR10V1 | 62% | 251 |
| Orang | OR10V1 | 62% | 250 |
| Horse | OR10V13 | 79% | 248 |
| Chimp | OR10V1 | 63% | 250 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | AW847973 |
Sequence information
| Nucleotide sequence |
TCCATGTACTTCTTCCTGACAAACTTTGCAGGTCTGGAGATCTTCTACTTTTTCACCATT GCCCCTCTGACTCTGGCCAATGTCCTACCCATGGGGAGAAACCTCATTTCCCTGCCCGGC TGTGGAGGCCAGATGTTCTTCTTCATCTTCCTGGGAAGGGCTGACTGCATCCTGCTGGCC GTCATGGCCTTTGACTGGTTTGTGGCCATCTGTTGTCCTCTCTGTTACGGCCTCATCATG AGCTGGAGGTTGTGTGTCCAGCTGACCCTGGGGTCTCTGCTGTTGGGGTTCTTCTTAGCC ATGCAGCTGACCGTGCTTATCTTCCAACTCCCTTTATGCAGCAGCAAAGAAATCAGCACG TTCTACTGTGATGTCCTCCCTGTCATGAGACTGGCCTGTGCAGATACCTGGGTCCATGAG GCCACTATGTCTATGGTCAGCACCACCTTTCTCACCGTCCCCTTCCTGCTCATCACTCTT TCCTATGTCTCCATCATGGCCGCCATCTTGAAGATTTGCTCTGCAGAGGGGAGGCACAAG GCCTTCTCCACCTTTCCTCCCACCTGACTGTGGTTCTCCTCCAGGACTGATGTACACGCC TCGCCTTCTTGTGTCCCAGCTCTAGCTACTATCCTGAGAGGGGCCAGGCAGTGTCTGTGG TTTACACCTTCATTACCCCTGTGCTGAACCCTTTGATCTACAGCATGAGGAACACAGAAC TTAAGGATGCTTTGAAGAGAGCAATGACGAGGGTCCCGCTGCTC |
| Conceptual translation |
SMYFFLTNFAGLEIFYFFTIAPLTLANVLPMGRNLISLPGCGGQMFFFIFLGRADCILLA VMAFDWFVAICCPLCYGLIMSWRLCVQLTLGSLLLGFFLAMQLTVLIFQLPLCSSKEIST FYCDVLPVMRLACADTWVHEATMSMVSTTFLTVPFLLITLSYVSIMAAILKICSAEGRHK AFST/SSHLTVVLLQDXTRLAFLCPSSSYYPERGQAVSVVYTFITPVLNPLIYSMRNT ELKDALKRAMTRVPLL Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 59,516,981 | 59,516,981 | SNP | A/C | rs11230068 (DbSNP) | |
| 11 | 59,516,464 | 59,516,464 | SNP | A/G | rs497596 (DbSNP) | |
| 11 | 59,516,804 | 59,516,804 | SNP | C/G | rs504320 (DbSNP) | |
| 11 | 59,516,411 | 59,516,411 | SNP | G/T | rs11230067 (DbSNP) | |
| 11 | 59,516,459 | 59,516,459 | SNP | T/C | rs507235 (DbSNP) | |
| 11 | 59,748,875 | 59,748,875 | SNP | C/T | 1000GP (CEU) | |
| 11 | 59,748,938 | 59,748,938 | SNP | G/T | 1000GP (CEU) | |
| 11 | 59,748,986 | 59,748,986 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 11 | 59,748,991 | 59,748,991 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 59,749,331 | 59,749,331 | SNP | C/G | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | T/C | 1000GP (YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 37 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.