OR11G1P Olfactory Receptor
| Gene Symbol | OR11G1P1 (View this gene in GeneCards) |
| Family | 11 |
| Subfamily | G |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR14-30, HsOR14.1.24P, ORL3709 |
| External Ids | HGNC: 15345 GeneBank: BK004617, NG_004352 ORDB: ORL3709 |
| Build #39 labels | OR11G1P |
| Chromosomal location | 14:20,179,228-20,180,178 (+) |
| Cluster | 14@20b |
| Synteny | CLIC#32 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR11G2 | 80.07% | 306 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR11G2B | 83% | 293 |
| Mouse | Or11g1 | 78% | 304 |
| Rat | Or11g1 | 81% | 303 |
| Cow | OR11G2B | 81% | 305 |
| Orang | OR11G30P | 84% | 302 |
| Horse | OR11G2E | 82% | 305 |
| Chimp | OR11G2 | 79% | 306 |
Sequence information
| Nucleotide sequence |
ATCTTCAACACCCCCAGCAACTCCAGCACCTTCACTGGCTTCATCCTCCTGGGCTTCCCT TGCCCCAGGGAGGGACAGATCCTCCTCGTTGTGCTCTTCACTGTTGTTTACCTCCTGACC CTCATGGGCAATGGTTCCATCAACTGTGCTGTGCACTGGGTCAGAGACTCCATGCCCCCA TGTACATCCTGCTCGCCAACTTCTCCTTCCTGGAGATCTGTTATGTCACCTCTACAGTCC CCAACGTGCTGGCCAACTTCCTCTCTGACACAAGATCATCTCGTTCTCTGGCTGCTTCCT CCAATTCTACTTTTTTTTCTCCTTGGGCTCTACAGAATGCTTTTTCCTGGGAGCTATGGC ATTTGACCTATACCTTGCCATCTGCCGGCCTCTACGCTATCCAACCATTATGACCAGACG TCTCTGCAACATTCTTGTGGGCAGCTGCTGGGTACTTGGTTTCTTGTGGTTCCTGATTCC TATCAGTGTCATTTCTCAAATGACCTGTGGATCTAGGATTATTGACCACTTCCCATGTGA CCCAGGTCCTCTGTTAGCCCTCACCTGTACCAGAGCCCCTCTACTAGAGTTGACTAGCTC CACCTTAAGTTCTCTACTTCTATTTATTCCCTTTCTCTTCATCGTGGGGTGCTATGCTCT GGTCCTGAGAGCTGTGTTGAGGGTTCCTTCAGCATCTGGAAGAAGAAAGGCTTTCTCTAC CTGTGGCTCCCACCTGGCTGTAGTTTCACTGTTTATGGCTCAATGATGATCACGTATGTG AGCCCAACATCTGGGCATGAATTCGGAATGCAGAAGACTGTGACTCTGTTCTATTCTGTG GTCACTCCCCTTATTAATCCTGTCATATACAGTCTGAGGAACAAGGAAATGAAACATGCA ATGAGGAACTACACTGTAATGTTTTATTTTCTAGAATTCATAGGGCTACAA |
| Conceptual translation |
IFNTPSNSSTFTGFILLGFPCPREGQILLVVLFTVVYLLTLMGNGSI/LCCALGQRLHA PMYILLANFSFLEICYVTSTVPNVLANFL/XKIISFSGCFLQFYFFFSLGSTECFFLG AMAFDLYLAICRPLRYPTIMTRRLCNILVGSCWVLGFLWFLIPISVISQMTCGSRIIDHF PCDPGPLLALTCTRAPLLELTSSTLSSLLLFIPFLFIVGCYALVLRAVLRVPSASGRRKA FSTCGSHLAVVSL/YGSMMITYVSPTSGHEFGMQKTVTLFYSVVTPLINPVIYSLRNKE MKHAMRNYTVMFYFLEFIGLQ Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 14 | 20,648,293 | 20,648,292 | Ins(1) | -/G | rs36034491 (DbSNP) | |
| 14 | 20,647,955 | 20,647,955 | SNP | A/G | rs1188541 (DbSNP) | |
| 14 | 20,647,690 | 20,647,690 | SNP | A/G | rs12890531 (DbSNP) | |
| 14 | 20,648,149 | 20,648,149 | SNP | A/G | rs59636197 (DbSNP) | |
| 14 | 20,647,920 | 20,647,920 | SNP | C/T | rs1188540 (DbSNP) | |
| 14 | 20,179,531 | 20,179,531 | SNP | A/G | 1000GP (CEU) | |
| 14 | 20,179,761 | 20,179,761 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 14 | 20,179,796 | 20,179,796 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 14 | 100 | -100 | SNP | A/G | 1000GP (YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 14 | 20,203,125 | 20,716,841 | CopyNumber | Variation_8765 (DGV) |
| 14 | 20,203,125 | 20,655,466 | CopyNumber | Variation_34656 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.