OR11H7P Olfactory Receptor
| Gene Symbol | OR11H7P1 (View this gene in GeneCards) |
| Family | 11 |
| Subfamily | H |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR14-32, HsOR14.1.28P, ORL70 |
| External Ids | HGNC: 15350 GeneBank: AB065888, AF399477, AF546294-AF546307, AY284389-AY284420, BK004619, NG_004354 ORDB: ORL70 |
| Build #39 labels | OR11H7P |
| Chromosomal location | 14:20,229,402-20,230,343 (+) |
| Cluster | 14@20b |
| Synteny | CLIC#32 |
| Remarks | Segregating Pseudo Gene, a nonsynonymous SNP rs1953558 (AA change=*/Q ) |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR11H4 | 68.15% | 314 |
| OR11H5P | 66.22% | 296 |
| OR11H6 | 65.47% | 307 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR11H7 | 85% | 314 |
| Mouse | Or11h7 | 80% | 313 |
| Rat | Or11h23-ps | 80% | 313 |
| Cow | OR11H7 | 85% | 314 |
| Orang | OR11H4 | 69% | 313 |
| Horse | OR11H7B | 87% | 312 |
| Horse | OR11H7 | 86% | 314 |
| Chimp | OR11H7 | 98% | 314 |
Expression evidences
| Source | Accession |
|---|---|
| mRNA | AB529249 |
| GNF Atlas2 | gnf1h11153_at |
Sequence information
| Nucleotide sequence |
ATGAATAACTCACAGATATCTACTGTGACGCAGTTTGTGTTGTTGGGGTTTCCTGGTCCC TGGAAAATTCAGATCATCTTTTTCTCAATGATTTTGTTGGTCTACATCTTCACTCTGACT GGGAATATGGCCATCATCTGTGCAGTGAGGTGGGACCATCGACTCCATACCCCTATGTAC GTGCTCCTAGCCAACTTCTCCTTCCTAGAGATCTGGTATGTGACCTGCACAGTCCCCAAC ATGCTGGTAAATTTTTTCTCCAAAACTAAGACCATATCATTCTCTGGATGTTTCACTCAG TTCCACTTCTTCTTTTCCCTGGGCACAACTGAATGCTTCTTCCTCTGTGTCATGGCTTAT GATCGGTACCTGGCCATCTGCCACCCACTGCACTATCCCTCCATTATGACTGGCCAGCTC TGTGGCATCTTGGTGTCTCTTTGTTGGCTCATTGGTTTCCTTGGACATTCAATTTCCATT TTCTTCATTTTTCAACTACCTTTCTGTGGTCCCAACATCATTGATCATTTTCTGTGTGAT GTAGACCCACTGATGGCATTGTCCTCTGCCCCTACTCACATCATAGGGCATGTGTTCCAT TCTGTGAGCTCTCTTTTCATCAACCTCACCATGGTGTACATCCTTGGGTCCTATACCTTG GTGCTCAGAACTGTGCTTTAGGTTCCTTCTTCAGCTGGATGGCAAAAGGCCATCTCTACC TGTGGGTCACACTTGGTTGTTGTGTCTCTGTTCTATGGAGCCATAATGCTGATGTATGTG AGTCCCACACCTGGCAACTCAGTTGCTATGCATAAGCTCATCACACTGATATATTCTGTG GTAACACCTGTCTTAAACCCCCTCATCTACAGCCTACGCAACAAGGACATGAAATATGCC CTCCATCATGTCTTCTGTGGAATGAGAATTATCCAGAGATCA |
| Conceptual translation |
MNNSQISTVTQFVLLGFPGPWKIQIIFFSMILLVYIFTLTGNMAIICAVRWDHRLHTPMY VLLANFSFLEIWYVTCTVPNMLVNFFSKTKTISFSGCFTQFHFFFSLGTTECFFLCVMAY DRYLAICHPLHYPSIMTGQLCGILVSLCWLIGFLGHSISIFFIFQLPFCGPNIIDHFLCD VDPLMALSSAPTHIIGHVFHSVSSLFINLTMVYILGSYTLVLRTVLXPSSAGWQKAIST CGSHLVVVSLFYGAIMLMYVSPTPGNSVAMHKLITLIYSVVTPVLNPLIYSLRNKDMKYA LHHVFCGMRIIQRS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 14 | 20,698,021 | 20,698,020 | Ins(1) | -/C | rs34053624 (DbSNP) | |
| 14 | 20,698,239 | 20,698,239 | rescued_nonsense | C/T | rs1953558 (DbSNP) | |
| 14 | 20,698,449 | 20,698,449 | SNP | A/G | rs11625707 (DbSNP) | |
| 14 | 20,697,589 | 20,697,589 | SNP | C/T | rs61993889 (DbSNP) | |
| 14 | 20,697,600 | 20,697,600 | SNP | G/T | rs12434822 (DbSNP) | |
| 14 | 20,698,068 | 20,698,068 | SNP | G/T | rs4981844 (DbSNP) | |
| 14 | 20,698,298 | 20,698,298 | SNP | G/T | rs1953559 (DbSNP) | |
| 14 | 20,229,430 | 20,229,430 | SNP | C/T | 1000GP (CEU) | |
| 14 | 20,229,441 | 20,229,441 | SNP | T/G | 1000GP (CEU, CHBJPT) | |
| 14 | 20,229,626 | 20,229,626 | SNP | C/T | 1000GP (CEU) | |
| 14 | 20,229,909 | 20,229,909 | SNP | G/T | 1000GP (CEU, CHBJPT) | |
| 14 | 20,230,080 | 20,230,080 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 14 | 20,230,139 | 20,230,139 | SNP | T/G | 1000GP (CEU, CHBJPT) | |
| 14 | 20,230,290 | 20,230,290 | SNP | A/G | 1000GP (CEU) | |
| 14 | 100 | -100 | SNP | T/G | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 14 | 20,203,125 | 20,716,841 | CopyNumber | Variation_8765 (DGV) |
| 14 | 20,697,461 | 20,700,502 | CopyNumber | #90 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.