OR11I1P Olfactory Receptor
| Gene Symbol | OR11I1P1 (View this gene in GeneCards) |
| Family | 11 |
| Subfamily | I |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR1-2, HsOR1.2.1P, ORL3079 |
| External Ids | HGNC: 14997 GeneBank: AB065444, AF399478, AF546308-AF546311, AF546313, AF546317, BK004741, NG_003221 ORDB: ORL3079 |
| Build #39 labels | OR11I1P, OR11I2P |
| Chromosomal location | 1:110,853,939-110,854,889 (+) |
| Cluster | 1@111 |
| Synteny | CLIC#2 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR11A1 | 47.73% | 308 |
| OR6F1 | 47.16% | 299 |
| OR6N2 | 46.71% | 304 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR11I1 | 85% | 317 |
| Mouse | Or11i1 | 81% | 313 |
| Rat | Or11i1 | 82% | 313 |
| Cow | OR5O1 | 50% | 301 |
| Orang | OR11A1 | 48% | 311 |
| Horse | OR11I1 | 85% | 313 |
| Chimp | OR11A1 | 47% | 312 |
Sequence information
| Nucleotide sequence |
ATGGTGATCCTGTCCTGGGAAAACCAAACGATGAGAGTGGAATTCGTGCTTCAAGGATTC TCTTCCATCAGACAGTTAAATATTTTCCTCTTTATGATAATTTTAGTTTTCTACATCTTA ACTGTTTCTGGAAACATCCTCATTGTCCTTCTAGTTTTAGTCAGACATCATCTCCACACC CCTATGTACTTCCTCCTGGTGAACTTGTCCTGTCTGGAGATCTGGTATACCTCTAACATC ATCCCCAAAATGTTGCTGATTATCATAGCTGAATAGAAGACTATCTCTGTGGCTGGCTGG CTGGCACAATTCTACTTCTTCGGATCCCTGGCTGCCACGGAGTGCCTCTTGCTCACTGTG ATGTCCTATGATCGCTACCTAGCCATCTGCCAGCCTCTTTGCTACCGTGTCCTCATGACT GGCCCCCTTTGCATCAGGCTAGCTGCTGGCTCTTGGTTCTGCTGCTTCCTCCTTACAGCA ATCACCATGGTCTTGCTATGTAGACTAACCTTCTGTGGACCCTATGAAACTGATCACTTC TTTTGTGACTTCACCCCTCTGGTTCATCTCTCCTGCATGGATACCTCAGTGACTGAGACC ATTGCCTTTGCCACCTCTTCTGCAGTAACTCTGATCCCATTTCTCCTCATTGTAGCCTCC TACTCCTGCGTCCTTTCTGCTATCCTAAGAATCCCATCTTGCACAGGCCAGAAAAAGGCC TTCTCCACCTGCTCTTCCCACCTCACTGTGGTCATAGTGTTTTATGGGACACTGATTGCC ACATACCTTGTGCCCTCAGCCAACTCATCCCAACTCTTGTGCAAAGGGTCCTCTCTGCTC TACATCATCCTGACACCCATGTTTAACCCCATCATTTATAGCCTGAGAAATAGAGACATC CATGAAGCTCTGAAGAAGTGCTTGAGGAAGAAGTCAGGTGTTTGCCTTAGA |
| Conceptual translation |
MVILSWENQTMRVEFVLQGFSSIRQLNIFLFMIILVFYILTVSGNILIVLLVLVRHHLHT PMYFLLVNLSCLEIWYTSNIIPKMLLIIIAEXTISVAGWLAQFYFFGSLAATECLLLTV MSYDRYLAICQPLCYRVLMTGPLCIRLAAGSWFCCFLLTAITMVLLCRLTFCGPYETDHF FCDFTPLVHLSCMDTSVTETIAFATSSAVTLIPFLLIVASYSCVLSAILRIPSCTGQKKA FSTCSSHLTVVIVFYGTLIATYLVPSANSSQLLCKGSSLLYIILTPMFNPIIYSLRNRDI HEALKKCLRKKSGVCLR Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 1 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
| 1 | 110,853,984 | 110,853,984 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 1 | 110,854,293 | 110,854,293 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 1 | 110,854,394 | 110,854,394 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 1 | 110,854,468 | 110,854,468 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 1 | 110,854,554 | 110,854,554 | SNP | T/G | 1000GP (CEU, CHBJPT) | |
| 1 | 110,854,608 | 110,854,608 | SNP | G/A | 1000GP (CEU) | |
| 1 | 110,854,694 | 110,854,694 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 1 | 110,854,829 | 110,854,829 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 1 | 111,396,606 | 111,396,606 | SNP | A/G | rs718463 (DbSNP) | |
| 1 | 111,396,915 | 111,396,915 | SNP | A/G | rs12730405 (DbSNP) | |
| 1 | 111,397,016 | 111,397,016 | SNP | A/G | rs12748133 (DbSNP) | |
| 1 | 111,397,090 | 111,397,090 | SNP | C/T | rs6672672 (DbSNP) | |
| 1 | 111,397,176 | 111,397,176 | SNP | G/T | rs6687919 (DbSNP) | |
| 1 | 111,397,230 | 111,397,230 | SNP | A/G | rs6698741 (DbSNP) | |
| 1 | 111,397,316 | 111,397,316 | SNP | A/G | rs6687898 (DbSNP) | |
| 1 | 111,397,451 | 111,397,451 | SNP | C/T | rs6690536 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 1 | 111,396,461 | 111,399,511 | CopyNumber | #25 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.