OR11N1P Olfactory Receptor
| Gene Symbol | OR11N1P1 (View this gene in GeneCards) |
| Family | 11 |
| Subfamily | N |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsORX.1.2P |
| External Ids | HGNC: 19582 GeneBank: NG_004381 |
| Build #39 labels | OR11N1P |
| Chromosomal location | X:131,324,334-131,325,313 (-) |
| Cluster | X@131a |
| Synteny | CLIC#48 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR10A4 | 44.44% | 306 |
| OR11H4 | 43% | 300 |
| OR11L1 | 41.8% | 323 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR10AG67 | 44% | 309 |
| Mouse | Or11n2 | 69% | 316 |
| Rat | Or11n2 | 70% | 316 |
| Cow | OR11N2P | 67% | 311 |
| Orang | OR10A5J | 45% | 306 |
| Horse | OR11N2 | 69% | 312 |
| Chimp | OR11N1 | 97% | 308 |
Expression evidences
| Source | Accession |
|---|---|
| GNF Atlas2 | gnf1h04905_s_at |
Sequence information
| Nucleotide sequence |
ATGGCTGGAACTGAAGAAGAAAACACGATTCAAATTTCAGAAATTATCTTTTTGGGTTTT GGGGATCTCCATGGCCTTCAGTTTCTTCTTTTTGGGATATTTCTGGCCATCTATGTGGTG ACTGTAATGGGCAACATTGCGATCCTGTGGTGTCAGCTAATCATTTCCTTCACACGCCCA TGTTTTTCTTTCTTGGTCACTTCTTCCTAGAGATTGGCTGCACCAGTACCATTGAGCCCA TGAGGCTGAGGACTGCCATCAGCTCATATGCCTTTTTACTTTCTAGCCTGTGTTTCCCAG TTTTACTTTTTGCCTTGGTGGCTACAGAATGCTTCTTCCTGGCTGTAATGTCTTATGATT GCTATATAGCCACCTGTAACCCACTGCAATACTTCAGCATCATGGACCACTGGAGTTGCT TACAGCTAGCTAGTGCCTCATGGGTGGCTGGATTTCTGGCATTCACTCTCCTCATTGTCC TCATTTTTCACTTAACATTCTGTTCCACCAATGTGGTCGAACACTTCCGTGATTTGAAGC CCATCATGAAACTGGTTTGCACTGACACTGAAGTAGCTCAGATGACCTCTTTTATATGCA CCTCTTTATTTGTCCTTGGCCCCTTCCTGCTGACCCTGGCTTCTTATGATCACATCATCA CTGCCGTTCTGAGGATTCCTTCTGCCACAGGAAAGCAGAGGGCTTTCTCCACCTGTTCCT CCCATCAGACTGTAGTTAGTCTCTATTATGGGGTACTGAGCATTGTTTATGGCTTCCCAT CAAGACTTATTGAAGTCTTGTATGAAGACTTATTGAAGTTACTTTCTATTCTGTATACAG TGCTTACCCCTGCCCTCAACCATATCATTTACACCTTAAGGAACAAGGATGGGAAGGTAG TTCTGAGAAAATTGGTGCAATAAGGAACATATAACTGGTCCAAAAAGAGTTTGAAATTTT TAGTGGCTTTTGGCACCTTC |
| Conceptual translation |
MAGTEEENTIQISEIIFLGFGDLHGLQFLLFGIFLAIYVVTVMGNIAI/VVSANHFLHT PMFFFLGHFFLEIGCTSTIEPMRLRTAISSYAFLLSSLCFPVLLFALVATECFFLAVMSY DCYIATCNPLQYFSIMDHWSCLQLASASWVAGFLAFTLLIVLIFHLTFCSTNVVEHFRDL KPIMKLVCTDTEVAQMTSFICTSLFVLGPFLLTLASYDHIITAVLRIPSATGKQRAFSTC SSHQTVVSLYYGVLSIVYGFPSRLIEVLYEDLLKLLSILYTVLTPALNHIIYTLRNKDGK VVLRKLVQXTYNWSKKSLKFLVAFGTF Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| X | 130,452,043 | 130,452,044 | large insertion | 8286bp insertion | rs72027882 (DbSNP) | |
| X | 130,458,408 | 130,458,408 | SNP | C/G | rs6634825 (DbSNP) | |
| X | 130,458,515 | 130,458,515 | SNP | A/G | rs12400469 (DbSNP) | |
| X | 130,458,654 | 130,458,654 | SNP | G/T | rs7881794 (DbSNP) | |
| X | 130,458,692 | 130,458,692 | SNP | C/T | rs58819548 (DbSNP) | |
| X | 130,458,924 | 130,458,924 | SNP | C/T | rs58548428 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 142 (Hasin) | |||
| X | 130,456,308 | 130,459,387 | Deletion | #320 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.