OR2AQ1P Olfactory Receptor
| Gene Symbol | OR2AQ1P1 (View this gene in GeneCards) |
| Family | 2 |
| Subfamily | AQ |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | ORL3066 |
| External Ids | HGNC: 15003 GeneBank: NG_004276 ORDB: ORL3066 |
| Build #39 labels | OR2AQ1P |
| Chromosomal location | 1:158,795,997-158,796,237 (+) |
| Cluster | 1@159a |
| Synteny | CLIC#4 |
| Remarks | Disrupted by Line repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR2Y1 | 50.85% | 59 |
| OR5I1 | 49.23% | 65 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Sequence information
| Nucleotide sequence |
CATGGAAAAAAAGTAAAAGTGTGGTCACCATGTTCTAAGGGCCCGCCATGATCACGTACT TGAGGTCTGACTCCTAGTATAACCTACAGTGGGAAAACAGTTGGTGCTGTTCTACAGCAT TGTCTCTGCCTTCATAAAACCCATCATCTCCAGCCTCAGGAACAAGGATGTAAAAGGGGC TTCTTGGAAAGTACTTAGAGTCAAAGGGACAGCTCAAGGACCTAGTATGCTTCAGAGTTT T |
| Conceptual translation |
SVVTMFXPAMITYLRSD/LVXTVGKQLVLFYSIVSAFIKPIISSLRNKDVKGASWKV LRVK/DSSRTXAS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 1 | 100 | -100 | SNP | C/T | 1000GP (YRI) | |
| 1 | 158,765,934 | 158,765,934 | SNP | C/T | rs7528690 (DbSNP) | |
| 1 | 158,796,052 | 158,796,052 | SNP | G/A | 1000GP (CEU) | |
| 1 | 158,796,144 | 158,796,144 | SNP | C/T | 1000GP (CEU) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 61 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.