OR2B4P Olfactory Receptor
| Gene Symbol | OR2B4P1 (View this gene in GeneCards) |
| Family | 2 |
| Subfamily | B |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | AL050339-A, dJ974I11.1, hs6M1-22, HsOR6.3.15P, ORL3170 |
| External Ids | HGNC: 8239 GeneBank: AB065472, AF399496, NG_004686 ORDB: ORL3170 |
| Build #39 labels | OR2B4P |
| Chromosomal location | 6:29,290,696-29,291,650 (+) |
| Cluster | 6@29 |
| Synteny | CLIC#12 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR2B2 | 64.71% | 306 |
| OR2B3 | 61.69% | 308 |
| OR2B6 | 61.74% | 311 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR2B2 | 67% | 308 |
| Mouse | Or2b4 | 91% | 314 |
| Rat | Or2b4 | 91% | 314 |
| Cow | OR2B4 | 90% | 314 |
| Orang | OR2B6 | 63% | 312 |
| Horse | OR2B4B | 91% | 319 |
| Horse | OR2B4 | 91% | 317 |
| Horse | OR2B4C | 89% | 314 |
| Chimp | OR2B2P | 63% | 311 |
Expression evidences
| Source | Accession |
|---|---|
| GNF Atlas2 | 208098_at |
Sequence information
| Nucleotide sequence |
CCTCCCAGTGCTAACATGTGGATCAACAATCAAAGCTCGCTAGATGATTTTATCCTATTG GGATTTTCTGACCGTCCCTGGCTAGAGACACCCCTCTGTAATCTTTCTGGTGGCCTACAT CTTTTCCCTATTTGGAAATATCTCCATTATCCTAGTTTCCCATCTGGATCCCCAGCTTGA CAGTCCCATGTACTTTTTTGTCTCTAATCTATCCTTTCTGGACCTCTGCTATACCACCAG CACTGTCCCACAGATGCTGGTCAACCTCCGGGGACCAGAAAAGACCATTAGCTATGGGGG TTGTGTTGCCCAACTCTATATATTTTTGGCCCTGGGTTCTACTGAATGCATACTTCTAGC CATCATGGCCTTTGACCGTTACGCTGCCATATGCAAGCCCCTTCACTACCCAGTCATCAT GAACCATAGACGCTGTATCCACATGGCTGCTGGCACTTGGATCAGTGGCTTTGCTAACTC CCTTGTCCAGTCCACTCTCACAGTGGTGGCCCCAAGATGTGGACAGAGGGTGTTGGACCA TTTCTTCTGTGAAGTTCCAGCCCTTTTGAAACTAGCCTGTATTGATATTCGTGTGAATGA AATGGAGCTCAATGTACTAGGCGCTTTGCTTCTCCTGATGCCACTCACCCTCATCCTGGG CACTTATGTGTTCATTGCTCAGGCAGTAATGAGAATCTGCTCTGCTGAAAGTCGCTGGAA GGCTTTCAATACCTGTGCCTCACATTTGCTGGTGGTCTCCCTCTTCTACTTCACAGCCAT CAGTATGTATGTCCAGCCTCCCTCTAGCTATTCTCATGACCGGGGGAAGATCATGGCTCT CTTTTATGGCATTGTCACACCCACCCTCAACCCATTCATCTACACATTGAGAAACAAGGA TGTGAAAGCTGCCCTGAGAAGGTCACTGACTAAAGAGTTTTGGATTAAGACAAGA |
| Conceptual translation |
PPSANMWINNQSSLDDFILLGFSDRPWLETPL\IFLVAYIFSLFGNISIILVSHLDPQL DSPMYFFVSNLSFLDLCYTTSTVPQMLVNLRGPEKTISYGGCVAQLYIFLALGSTECILL AIMAFDRYAAICKPLHYPVIMNHRRCIHMAAGTWISGFANSLVQSTLTVVAPRCGQRVLD HFFCEVPALLKLACIDIRVNEMELNVLGALLLLMPLTLILGTYVFIAQAVMRICSAESRW KAFNTCASHLLVVSLFYFTAISMYVQPPSSYSHDRGKIMALFYGIVTPTLNPFIYTLRNK DVKAALRRSLTKEFWIKTR Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 6 | 29,259,154 | 29,259,154 | SNP | A/G | rs71561304 (DbSNP) | |
| 6 | 29,258,863 | 29,258,863 | SNP | A/T | rs1123283 (DbSNP) | |
| 6 | 29,291,086 | 29,291,086 | SNP | T/A | 1000GP (CEU, CHBJPT) | |
| 6 | 100 | -100 | SNP | T/A | 1000GP (YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.