OR2Q1P Olfactory Receptor
| Gene Symbol | OR2Q1P1 (View this gene in GeneCards) |
| Family | 2 |
| Subfamily | Q |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | DJ0669B10, OR7-8, OR7-2, HsOR7.6.8P, ORL3183 |
| External Ids | HGNC: 8273 GeneBank: AF399458, BK004541, NG_004310 ORDB: ORL3183 |
| Build #39 labels | OR2Q1P |
| Chromosomal location | 7:143,980,905-143,981,832 (+) |
| Cluster | 7@144 |
| Synteny | CLIC#16 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR2F1 | 58.47% | 301 |
| OR2F2 | 57.19% | 306 |
| OR2R1P | 56.77% | 303 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR2Q1 | 81% | 310 |
| Mouse | Or2q1 | 76% | 310 |
| Rat | Or2q1 | 75% | 310 |
| Cow | OR2Q1 | 75% | 310 |
| Orang | OR2Q1 | 89% | 310 |
| Horse | OR2Q1 | 80% | 310 |
| Chimp | OR2Q1 | 95% | 310 |
Sequence information
| Nucleotide sequence |
ATGGGTCAGGAAAATAAAAACCAGACATGGGTGAGTGAGTTCATTCTGCTGGGGATTTCC AGTGATTGGGGCATTCAGGTATCCCTCTTCGCCCTGATCCTGGCCATGTATTTGGTGACT ATTTTAGGAAACACCCTCATTCTTCTTCTGATCAGACTGGACAACAGGCTTCATACCCCC ATGTACTTCTCCCTTAGTGTTCTGTCATTTGTGGACTTTTGTTATACAAAGAGTATTGTC CCACAAATGCTGTCCCACTTGCTCTCAGCCCGAAAGTCCATCCCATTCTACAGTTGTGTG CTCCAGCTCTATGTTTCTCTGGCATTGTGTGGGTCTGAGTTCTTCCTGCTGGGGGCCATG GCCTATGACCGCTACGTGGCCGTGTGCCACCCACTGCACTACACGGTCATCATGCATGGA GGGCTGTGCCTGGGGCTGGCGGCCAGCCGCCTGGTGGCTGGCTTCTCAAATTCCCTGATG GAAACAATTATCACCTTCCAGCTTCCTGTGTCACGGTGTTATCAATCACTTTGTCTGTGA GACCTTAGCAGTGCTACAGCTAGCCTGTGTGGATGTCCCCTTCAACAAGGTCATGGTGGC CATCTCAGGGTTTCTGGTGATCTTGCTTCCCTGTTCCCTGGTTCTATTCTCCTATGCTTG CATAGTTGCCACCATTTTGTGCATTCGTTCTACCCAGGTACGCTGCAAAGCCTTTGGGAC CTGTGCCTCTCACCTCATTGTGGTTTGCATGTGCTTTGGGGCTACCATCTGCACCTACCT GGGGCCACAGTTGGCCTCCTCAGCAGAGGAAGAGAAGATGATTGCTCTCTTCTATGGAGT GGTGTCACCCATGTTGAACCCCTTGATCTACAGCTTGAGGAATAAGGAAGTTACGGCTGC TGTCCGGAAAGTTTTAGAAAGATGCAGA |
| Conceptual translation |
MGQENKNQTWVSEFILLGISSDWGIQVSLFALILAMYLVTILGNTLILLLIRLDNRLHTP MYFSLSVLSFVDFCYTKSIVPQMLSHLLSARKSIPFYSCVLQLYVSLALCGSEFFLLGAM AYDRYVAVCHPLHYTVIMHGGLCLGLAASRLVAGFSNSLMETIITFQLPVSR\INHFVC ETLAVLQLACVDVPFNKVMVAISGFLVILLPCSLVLFSYACIVATILCIRSTQVRCKAFG TCASHLIVVCMCFGATICTYLGPQLASSAEEEKMIALFYGVVSPMLNPLIYSLRNKEVTA AVRKVLERCR Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 7 | 100 | -100 | SNP | T/C | 1000GP (YRI) | |
| 7 | 143,678,677 | 143,678,677 | SNP | C/T | rs1034773 (DbSNP) | |
| 7 | 143,678,747 | 143,678,747 | SNP | A/T | rs11768156 (DbSNP) | |
| 7 | 143,981,584 | 143,981,584 | SNP | T/C | 1000GP (CEU, CHBJPT) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 7 | 143,147,775 | 144,368,638 | CopyNumber | Variation_3708 (DGV) |
| 7 | 143,208,034 | 143,736,035 | CopyNumber | Variation_5247 (DGV) |
| 7 | 143,217,296 | 144,074,520 | CopyNumber | Variation_32962 (DGV) |
| 7 | 143,545,719 | 143,874,190 | CopyNumber | Variation_53583 (DGV) |
| 7 | 143,572,286 | 143,866,532 | CopyNumber | Variation_8581 (DGV) |
| 7 | 143,615,165 | 143,744,519 | CopyNumber | Variation_0110 (DGV) |
| 7 | 143,677,645 | 143,716,639 | CopyNumber | Variation_36642 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.