OR2S1P Olfactory Receptor
| Gene Symbol | OR2S1P1 (View this gene in GeneCards) |
| Family | 2 |
| Subfamily | S |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OST611, HsOR9.1.6P, ORL326 |
| External Ids | HGNC: 8275 GeneBank: AF399466, NG_004379 ORDB: ORL326 |
| Build #39 labels | OR2S1P |
| Chromosomal location | 9:36,013,184-36,014,130 (+) |
| Cluster | 9@36 |
| Synteny | CLIC#17 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR13C6P | 83.23% | 316 |
| OR13C7P | 81.96% | 316 |
| OR2S2 | 79.62% | 319 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Sequence information
| Nucleotide sequence |
ATGAACAGGTCCAATGAGGCCTCCCCTGTGTTGGGGTTCGTTCTCCTGGGCCTCTCTGCC CACCCATAGCTGGAGAAGACATTCTTTGTGTTCATCCTGCTGGTGTACCTGGTGATCCTG CTGGGCAACGGGGTCCTCATCCTGGTGACCATCCTTGACTCCCGCCTGCACACACCCATG TACTTCTTCCTGGGGAACCTCTCCTTCCTGGACATCTGCTATACAACCTCCTCATCCTTG ACAGCTTCCTGACCCCCAGGAAAACCATCTCCTTCTCAGCCTGTGCAGTACAGATGTTCC TCTCCTTTGCCATGGGAGCCACAGAGTGTGTTCTCCTGAGCATGATGGCTTTTGATCACT ACCTGGACATGTGCAACCCCCTTAGGTACCCTGTGGTCATGAGCAAGGCTGCCTACATGC CCATGGCTGTTGGCTCCTGGGCAGCTGGTATCACCAACTCTGTAGTACAGATATCCCTAG CAATGTGACTGCCCTTCTGTGGGGACAATGTCATCAATCACTTCACCTGTGAGATCCTGG CAGTTCTAAAGTTGGCCTGTGCTGACATCTGCATCAACGTGATCAGCATGGTTGTGACCA ACATGATCTTCCTTGCACTCCCAGTCCTGTTTATTTTTGTCTCATATGTCTTCATCATTG CCACCATCCTGAGAATCCCCTCAGCTGAGGGGAGGAAAAAGGCCTTCTCCACCTGCTCTG CCCACCTCACTGTCGTGATCGTCTTCTATGGGATGATCCTCTTCATGTATGGGAAGCCCA AGTCTAAGGACCCAATGGGAGCAGACAAACAGGACCTTGCAGACAAACTCATCTCCATTT TCTATGGAGTGGTGACCCCCATTCTCAACCCCATCATCTACAGCCCGAGGAACAAAGATT TGAAAGCTGCTATGAGGAACCTGGTGGCTCAAAAACACCTAACAGAG |
| Conceptual translation |
MNRSNEASPVLGFVLLGLSAHPXEKTFFVFILLVYLVILLGNGVLILVTILDSRLHTPM YFFLGNLSFLDICYTTSSSL/SFLTPRKTISFSACAVQMFLSFAMGATECVLLSMMAFD HYLDMCNPLRYPVVMSKAAYMPMAVGSWAAGITNSVVQISLAMXPFCGDNVINHFTCEI LAVLKLACADICINVISMVVTNMIFLALPVLFIFVSYVFIIATILRIPSAEGRKKAFSTC SAHLTVVIVFYGMILFMYGKPKSKDPMGADKQDLADKLISIFYGVVTPILNPIIYSPRNK DLKAAMRNLVAQKHLTE Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 9 | 36,013,955 | 36,013,955 | SNP | A/G | rs2017240 (DbSNP) | |
| 9 | 36,013,199 | 36,013,199 | SNP | A/G | rs7865316 (DbSNP) | |
| 9 | 36,013,929 | 36,013,929 | SNP | C/T | rs2017241 (DbSNP) | |
| 9 | 36,013,202 | 36,013,202 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 9 | 36,013,584 | 36,013,584 | SNP | G/A | 1000GP (CEU) | |
| 9 | 36,013,932 | 36,013,932 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 9 | 36,014,052 | 36,014,052 | SNP | C/G | 1000GP (CHBJPT) | |
| 9 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 9 | 36,005,884 | 36,453,176 | CopyNumber | Variation_47924 (DGV) |
| 9 | 36,013,081 | 36,016,127 | CopyNumber | #144 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.