OR2W6P Olfactory Receptor
Gene Symbol | OR2W6P1 (View this gene in GeneCards) |
Family | 2 |
Subfamily | W |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | OR6-3, HsOR6.2.2P, ORL3146 |
External Ids | HGNC: 15072 GeneBank: AB065475, BK004697, NG_004260 ORDB: ORL3146 |
Build #39 labels | OR2W6P, OR2W7P |
Chromosomal location | 6:27,937,403-27,938,400 (+) |
Cluster | 6@28a |
Synteny | CLIC#12 |
Remarks |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR2W1 | 64.26% | 305 |
OR2W3 | 66.56% | 305 |
OR2W4P | 66.12% | 307 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|---|---|---|
Dog | OR2W6 | 91% | 312 |
Mouse | Or2w6 | 95% | 312 |
Rat | Or2w6 | 94% | 312 |
Rat | Or2w6b | 91% | 312 |
Cow | OR2W6 | 93% | 312 |
Cow | OR2W6CP | 92% | 308 |
Orang | OR2W4 | 67% | 307 |
Horse | OR2W6 | 94% | 311 |
Chimp | OR2W6 | 98% | 312 |
Expression evidences
Source | Accession |
---|---|
GNF Atlas2 | gnf1h11116_at |
Sequence information
Nucleotide sequence |
CTATATCTCTGCTATTCACAGGCATTCATCTTTCTCTCAACAGGTAATATGTAGCTGCAG GTGTGGAAAACGATAATACAAGTTCTTTCGAAGGCTTCATCCTGGTGGGCTTCTCTGATC GTCCCCACCTAGAGCTGATCGTCTTTGTGGTTGTCCTCATCTTTTATCTGCTGACTCTTC TTGGCAACATGACCATTGTCTTGCTTTCAGCTCTGGATTCCCGGCTGCACACACCAATGT ATTTCTTTTTGGCAAACCTCTCATTCCTGGACATGTGTTTCACCACAGGTTCCATCCCTC AGATGCTCTACAACCTTTGGGGTCCAGATAAGACCATCAGCTATGTGGGTTGTGCCATCC AGCTGTACTTTGTCCTGGCCCTGGGAGGGGTGGAGTGTGTCCTCCTGGCTGTCATGGCAT ATGACCGCTATGCTGCAGTCTGCAAACCCCTGCACTACACCATCATCATGCACCCACGTC TCTGTGGACAGCTGGCTTCAGTGGCATGGCTGAGTGGCTTTGGCAATTCTCTCATAATGG CACCCCAGACATTGATGCTACCCCGCTGTGGGCACAGACGAGTTGACCACTTTCTCTGTG AGATGCCAGCACTAATTGGTATGGCCTGTGTAGACACCATGATGCTTGAGGCACTGGCTT TTGCCCTGGCAATCTTTATCATCCTGGCACCACTCATCCTCATTCTCATTTCTTATGGTT ACGTTGGAGGAACAGTGCTTAGGATCAAGTCAGCTGCTGGGCGAAAGAAAGCCTTCAACA CTTGCAGCTCGCATCTAATTGTTGTCTCTCTCTTCTATGGTACAATCATATACATGTACC TCCAGCCAGCAAATACTTATTCCCAGGACCAGGGCAAGTTTCTTACCCTTTTCTACACAA TTGTCACTCCCAGTGTTAACCCCCTGATCTATACACTAAGAAACAAAGATGTTAAAGAGG CCATGAAGAAGGTGCTAGGGAAGGGGAGTGCAGAAATA |
Conceptual translation |
LYLCYSQAFIFL/NRXVAAGVENDNTSSFEGFILVGFSDRPHLELIVFVVVLIFYLLT LLGNMTIVLLSALDSRLHTPMYFFLANLSFLDMCFTTGSIPQMLYNLWGPDKTISYVGCA IQLYFVLALGGVECVLLAVMAYDRYAAVCKPLHYTIIMHPRLCGQLASVAWLSGFGNSLI MAPQTLMLPRCGHRRVDHFLCEMPALIGMACVDTMMLEALAFALAIFIILAPLILILISY GYVGGTVLRIKSAAGRKKAFNTCSSHLIVVSLFYGTIIYMYLQPANTYSQDQGKFLTLFY TIVTPSVNPLIYTLRNKDVKEAMKKVLGKGSAEI Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
6 | 27,905,403 | 27,905,403 | SNP | A/G | rs72848764 (DbSNP) | |
6 | 27,905,509 | 27,905,509 | SNP | C/T | rs67040724 (DbSNP) | |
6 | 27,937,731 | 27,937,731 | SNP | T/C | 1000GP (CEU) |
Variations - CNVs
Chr | Start | End | Type | Sources |
---|---|---|---|---|
CopyNumber | 69 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.