OR4D7P Olfactory Receptor
| Gene Symbol | OR4D7P1 (View this gene in GeneCards) |
| Family | 4 |
| Subfamily | D |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-245, HsOR11.13.12P, ORL3604 |
| External Ids | HGNC: 15176 GeneBank: AF399439, BK004759, NG_004233 ORDB: ORL3604 |
| Build #39 labels | OR4D7P |
| Chromosomal location | 11:59,531,697-59,532,710 (+) |
| Cluster | 11@59a |
| Synteny | CLIC#27 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR4D10 | 67.09% | 316 |
| OR4D11 | 71.84% | 316 |
| OR4D9 | 72.78% | 316 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR4D9D | 78% | 322 |
| Mouse | Or4z4 | 73% | 316 |
| Rat | Or4d10c | 71% | 318 |
| Cow | OR4D9D | 75% | 325 |
| Orang | OR4D11 | 71% | 322 |
| Horse | OR4D9K | 79% | 316 |
| Chimp | OR4D9 | 73% | 316 |
Sequence information
| Nucleotide sequence |
CCTTCTATAACAAAATCTCTCCCCAGGTGGTTGAAGAACAAGAAGAAACATGATCCCATT GAGCAGGGAAATTACACCAGGGTGAAGGAATCTCTTTTTTCAAGGACTGACCCAGTCCCA AGAGCTGAGCTTGGTCTTATTTCTTTTCTTATTTTTTGTGTACTCAGCAACTGTGCTGGG TAACCTCCTCATCATGGTCGTGGTGACCTGTGAGTCTCGCCTTCACACCCCCACGTACTT CCTGCTCTGCAATCTCTCTGTGTTGGTTATCTGCTTCTCCTCCATCACTGCTCGGAAGGT GCTAATAGACCTTTCAAGCAGAAAGACCATCTCCTTCAATGGTTGCATGACACAGATGTT TTTCTTCCACCTCCTCGGTGGGACAGACGTTTTTTCTCTCTTTGTGATGGCGTTTGACCA ATACATGGCCATCTTCAAGCCCCTGCACTGTGTGACCATCGTGAGTAGGGGACAGTGCTC CCCTACATCGTGAGTAGGGGGCGTGAGTGAGGCGCAGGCCTCATCATGGCTTCCTGGGTG GGGGGTTTGTCCACTCCATTGTGCAGGTATTTCTGTTGCTCCCACTCCCTTCTGTGGACA TCATATGATTGATGGTTTCTACTGTGATGTCCCCCAGGTCCTCAAACTTGCCTGCACCCA CACCTTTGCTCTTGAGGTCTTAATGATTTCCAATAATGGCTTGATCTCTATGCTGTGGTT CATCTTTCTCCTCATATCTTACACGGTCATCTTGATGATGCTGAGGTCTCACACTGAGGA AGGCAGGAGGAAAGCCATCGCCACCTGCACCTCCCACATCACTGTGGTGACCCTGCATTT CGTGCCCTGCATCTATGTGCATGCCCAGCCTTCACTGCCCTCCCCACGGACAGAGCTGTC TCCATCACCTTTACAGTCATTATTCCTGTCCTGAACCCCATGATCTACACCCTGAGGAAC CAGGAGATGAAGTCAGCCTTGAGGAGGCGGAAGAAAAGACCTTCTGGAAAGGGA |
| Conceptual translation |
PSITKSLPRWLKNKKKHDPIEQGNYTRVKE\FFQGLTQSQELSLVLFLFLFFVYSATVL GNLLIMVVVTCESRLHTPTYFLLCNLSVLVICFSSITARKVLIDLSSRKTISFNGCMTQM FFFHLLGGTDVFSLFVMAFDQYMAIFKPLHCVTIVSRGQXLPYIVSRGREXAGLIMAS W/GGFVHSIVQVFLLLP/PFCGHHMIDGFYCDVPQVLKLACTHTFALEVLMISNNGLI SMLWFIFLLISYTVILMMLRSHTEEGRRKAIATCTSHITVVTLHFVPCIYVHAQPSLP/ PTDRAVSITFTVIIPVLNPMIYTLRNQEMKSALRRRKKRPSGKG Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 59,300,141 | 59,300,141 | SNP | A/G | rs7927216 (DbSNP) | |
| 11 | 59,532,029 | 59,532,029 | SNP | C/T | 1000GP (CEU) | |
| 11 | 59,532,441 | 59,532,441 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 59,532,500 | 59,532,500 | SNP | C/A | 1000GP (CEU) | |
| 11 | 100 | -100 | SNP | G/T | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.