OR4G1P Olfactory Receptor
| Gene Symbol | OR4G1P1 (View this gene in GeneCards) |
| Family | 4 |
| Subfamily | G |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OLB, HsOR19.1.2P, ORL3744 |
| External Ids | HGNC: 8302 GeneBank: NG_004133 ORDB: ORL3744 |
| Build #39 labels | OR4G1P |
| Chromosomal location | 19:104,601-105,469 (+) |
| Cluster | 19@0 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR4G11P | 97.93% | 290 |
| OR4G2P | 98.97% | 290 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR4G11 | 82% | 288 |
| Mouse | Or4g7 | 79% | 287 |
| Rat | Or4g7 | 80% | 289 |
| Cow | OR4G2 | 83% | 290 |
| Orang | OR4G2P | 91% | 278 |
| Horse | OR4G2 | 83% | 290 |
| Chimp | OR4G2 | 98% | 290 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BI035310 |
Sequence information
| Nucleotide sequence |
ATGCAGTTTTTCCTTTTTCTCTTCTTCTCTTTATTCTATGTGGGAATTATCCTGGGAAAC CTCTTCATTGTGTTCACAGTGATCTTTGATCCTCACTTACACTCCCCCATGTATATTCTG CTGGCCAACCTATCGCTCATTGACTTGAGCCTTTCATCTACCACAGTTCCTAGGTTGATC TACGATCTTTTTACTGATTGTAAAGTTATTTCCTTCCATAATTGTATGATACAAAAGTTC TTTATCCATGTTACGGGAGGAGTTGAAATGGTGCTGCTGATAGTCATGGAATATGATAGG TACACTGCGATCTGCAAGCCTCTCCACTATCCAACTATTATGAATCCCAAAATGTGCATG TTTTTGGTAGCAGCAGCTTGGGTCATTGGGGTGATTCATGCTATGTCTCAGTTTGTTTTT GTCATAAATTAACCTTCTGTGGCCCTAATAATGTGGGGAGCTTTTATTGTGATTTTCCTC GGGTTATTAAACTTGCATGCATGGACACTTACGGGCTAGAATTTGTGGTCACTGCCAACA GTGGATTCATATCGATGGGCACCTTCTTTTTCTTAATTGTATCATACATTTTTATTCTGG TCACTGTCCAACGACATTCCTCAAATGATTTATCCAAAGCATTCTTCACTTCGTAGGCTC ACATCACCGTAGTGGTTTTGTTTTTTGCTCCATGCATGTTTCTCTACGTGTGGCCTTTCC CTACTAAGTCATTGGATAAATTTTTTGCCATCATGAACTTTGTTGTCACCCCTGTCTTAA ATCCTGCCATCTATACTTTAAGGAACAAAGATATGAAGTTTGCAATGAGAAGGCTGAATC AACATATTTTAAATTCTATGGAGACGACA |
| Conceptual translation |
MQFFLFLFFSLFYVGIILGNLFIVFTVIFDPHLHSPMYILLANLSLIDLSLSSTTVPRLI YDLFTDCKVISFHNCMIQKFFIHVTGGVEMVLLIVMEYDRYTAICKPLHYPTIMNPKMCM FLVAAAWVIGVIHAMSQFVFVINXPFCGPNNVGSFYCDFPRVIKLACMDTYGLEFVVTA NSGFISMGTFFFLIVSYIFILVTVQRHSSNDLSKAFFTSXHITVVVLFFAPCMFLYVWP FPTKSLDKFFAIMNFVVTPVLNPAIYTLRNKDMKFAMRRLNQHILNSMETT Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 19 | 104,854 | 104,854 | SNP | C/T | rs2346358 (DbSNP) | |
| 19 | 104,945 | 104,945 | SNP | T/C | rs72481017 (DbSNP) | |
| 19 | 105,021 | 105,021 | SNP | C/G | rs7260412 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 25 (Hasin) | |||
| 19 | 60,070 | 172,370 | CopyNumber | Variation_73240 (DGV) |
| 19 | 60,070 | 243,098 | CopyNumber | Variation_73242 (DGV) |
| 19 | 60,179 | 119,175 | CopyNumber | Variation_78021 (DGV), Variation_89026 (DGV) |
| 19 | 60,354 | 168,972 | CopyNumber | Variation_30879 (DGV) |
| 19 | 89,677 | 119,175 | CopyNumber | Variation_89027 (DGV) |
| 19 | 89,677 | 123,389 | CopyNumber | Variation_78022 (DGV) |
| 19 | 89,677 | 165,529 | CopyNumber | Variation_78024 (DGV) |
| 19 | 104,677 | 104,829 | Del(-10) | #28(modil) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.