OR4R3P Olfactory Receptor
| Gene Symbol | OR4R3P1 (View this gene in GeneCards) |
| Family | 4 |
| Subfamily | R |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | ORL3635 |
| External Ids | HGNC: 15182 GeneBank: NG_004230 ORDB: ORL3635 |
| Build #39 labels | OR4R3P |
| Chromosomal location | 11:49,923,050-49,923,887 (+) |
| Cluster | 11@50 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR4R1P | 71.85% | 270 |
| OR4R2P | 68.48% | 257 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR4C58 | 59% | 206 |
| Mouse | Or4c58 | 60% | 209 |
| Rat | Or4c58 | 59% | 206 |
| Cow | OR4C21P | 56% | 209 |
| Orang | OR4C9P | 53% | 210 |
| Horse | OR4C2 | 54% | 212 |
| Chimp | OR4R1P | 77% | 206 |
Sequence information
| Nucleotide sequence |
ATGATAACCATCTTATGGGAAATATCTAAACCAGTAAATAATATTTTTCTAACACTTTCT GTAAGATATCAAATGCTAATCACTACTGTGTCATAATTGTAAATGAAATTATAATATAAA TTTACTGAGTTTTTCTGAGTACCTAATGAGTTAAAAAATATGGGAGCATATGTAGTACTG TGCTTGTATCAATATGGATAAGGTATCTGGAAGTCTTTTCTGAACATCTTTCGGTGCTGC TGAGATTATTCCACTGATGGGGATGGTCCATGGCTGCTATGTGACCATCTGCACTGCATG AAAATCATGACTCAATATAGGTGTGGCCATCTTGCTGGAATGGCATGCACTGGAAGATTT ATCCAGGCACAGTTTAGATCCTCTCCCCAGTCTGACTTCCTTTCTATAATTCCAATGTCA CAATATGAATAGCCCATTCATATGTGACTTAAACACTTTGTTGAAGCTCCTCTGCATAGG TAGTATGATACACTTGGTCTCTTTGTTGCTGCCAATGATGGGTTCAACTGCCTGTTAAAC ATCATCTTCTTGATGGTTTCTTAAGTGGCCATCCTATATACTTTGAAATCCCACAGCTTG GAGGAAAGATACAAAGCTCTCTCTACCTGTGTCTCTCACACCACCGTGGCCATCTAATTC TTTGTGTTCTGTATACTTGTGTATCTGTGCCCAGTGACCCTTCCCCAGTCAGTAAAGCAG TGGCTGTGCTTTACACCATGATAACGCCTACATTAAACCCTTTAGTCTAACCCTCAGAAA TGCAGAGGTGAAAAGTGTTGAGAAACTTCTGGGTCAAAAGATGACTTGAAGAGAGAAA |
| Conceptual translation |
MITILWEISKPVNNIFLTLSVRYQMLITTV\NCKXYNINLLSFSEYLMSXI\SICS TVLVSIWIRYLEVFSEH/FGAAEIIPLMGMVHGCYVTICTA/KIMTQYRCGHLAGMAC TGRFI/GTVXLSPVXPFYNSNVTIXA/FICDLNTLLKLLCIGS/DTLGLFVAAN DGFNCLLNIIFLMVSXAILYTLKSHSLEERYKALSTCVSHTTVAIXFVFCILVYLCPV /PSPVSKAVAVLYTMITPTLNPLV/TLRNAEVKSVEKLLGQKMTXEK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 49,944,874 | 49,944,874 | SNP | A/G | rs7946556 (DbSNP) | |
| 11 | 49,944,631 | 49,944,631 | SNP | G/A | rs2903410 (DbSNP) | |
| 11 | 49,944,780 | 49,944,780 | SNP | G/T | rs73468971 (DbSNP) | |
| 11 | 49,945,282 | 49,945,282 | SNP | T/G | rs1829949 (DbSNP) | |
| 11 | 49,923,322 | 49,923,322 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 49,923,730 | 49,923,730 | SNP | G/T | 1000GP (CEU, CHBJPT) | |
| 11 | 49,923,776 | 49,923,776 | SNP | T/G | 1000GP (CHBJPT) | |
| 11 | 49,923,873 | 49,923,873 | SNP | A/G | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 49,732,291 | 50,117,547 | CopyNumber | Variation_6919 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.