OR51F5P Olfactory Receptor
| Gene Symbol | OR51F5P1 (View this gene in GeneCards) |
| Family | 51 |
| Subfamily | F |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.3.18 |
| External Ids | HGNC: 31283 GeneBank: NG_004321 |
| Build #39 labels | |
| Chromosomal location | 11:4,709,569-4,710,510 (+) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR51C4P | 70.17% | 295 |
| OR51F3P | 70.85% | 295 |
| OR51F4P | 71.67% | 300 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR51F23 | 71% | 312 |
| Mouse | Or51f5 | 88% | 312 |
| Rat | Or51f5 | 86% | 312 |
| Cow | OR51F5B | 88% | 314 |
| Cow | OR51F5C | 88% | 314 |
| Cow | OR51F5 | 88% | 314 |
| Orang | OR51F5 | 93% | 314 |
| Horse | OR51F5 | 90% | 313 |
| Horse | OR51F5D | 88% | 312 |
| Chimp | OR51F5 | 96% | 299 |
Sequence information
| Nucleotide sequence |
ATGCCATCCTTCAACCAGAGTATTTTCCACCCTGCAGTCTTCTTCCTTACTGGCATCCCT GGCCTTGAAACCCGTCAGATCTGGACCTCCATCCCATTCTGTTGTCTCTATGTCATTGCT ATCTCTGGGAATGGCATGATCCTGTTTGTCATCATCACTGAGTCAAGCCTCCATGAACCC ATGTATCATTTTCTCTCCATGCTATCCTTCATGGACCTAGGTCTGTGTCTTTCTACATTG ACCACCATGCTGGGTATTTTCTGGTTCAATGCTCGAGAAATCAGTTTTGATGCCTGCATT GGCCAAATGTTCTTTATCCATGGCTTCACATTCATGGAGTCCTCAGTACTTTTGGCAATG GCCTTTGACCGCTTTATTGCCGTCTGTAACCCACTGAGATATGCCACAATCTTAACCAAT TCACGGATTATTAAAGTGGGCTTTGCAATTGTTCTTAGGGGAACAACAGCTCTAGTGCCT CTACTCCTGCTCCTTAAGCGCCTCTCCTTCTGCCGTAGTCATGTGCTCCACCATTCCTAC TGCTTCCACCCTGATGCGATGAAGCTCTCATGCACAGACACATGGATCAACAGTGCATTT GGCCTGGCCATTGTTATCTCTACTGCTGGCTTAGACTCTGTCTTGATCCTCATCTCCTAT GTTCTGATCGTCCGCTCTGTGCTCTGCATTGCCTCCCCAGAGGAGCAGAAAAAGGCTTTT GGTACCTGTGTCTCTCACATCAGTGCAGTTGCCATCTTCTACATCCCCATGATCAGTTTG TCACCAGTGCACAGATTTGGAAAGCATGCCCCTCCCCTTGTGCACATGCTCATTGCCAAT GTTTATCTGCTTATCCCTCCTGTAATGAATCCCATAATCTACAGTGTAAAGACCAAGTAA ATTCGCAAGGCTGTGCTCAAAGCATTTCTTTCTAAGCTAATT |
| Conceptual translation |
MPSFNQSIFHPAVFFLTGIPGLETRQIWTSIPFCCLYVIAISGNGMILFVIITESSLHEP MYHFLSMLSFMDLGLCLSTLTTMLGIFWFNAREISFDACIGQMFFIHGFTFMESSVLLAM AFDRFIAVCNPLRYATILTNSRIIKVGFAIVLRGTTALVPLLLLLKRLSFCRSHVLHHSY CFHPDAMKLSCTDTWINSAFGLAIVISTAGLDSVLILISYVLIVRSVLCIASPEEQKKAF GTCVSHISAVAIFYIPMISLSPVHRFGKHAPPLVHMLIANVYLLIPPVMNPIIYSVKTKXbr/>IRKAVLKAFLSKLI Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 4,731,180 | 4,731,180 | SNP | A/G | rs4432013 (DbSNP) | |
| 11 | 4,731,468 | 4,731,468 | SNP | A/G | rs4436535 (DbSNP) | |
| 11 | 4,731,570 | 4,731,570 | SNP | A/G | rs6578520 (DbSNP) | |
| 11 | 4,731,539 | 4,731,539 | SNP | C/T | rs7109254 (DbSNP) | |
| 11 | 4,730,871 | 4,730,871 | SNP | C/T | rs57324092 (DbSNP) | |
| 11 | 4,731,583 | 4,731,583 | SNP | C/T | rs4471413 (DbSNP) | |
| 11 | 4,730,837 | 4,730,837 | SNP | C/T | rs61743579 (DbSNP) | |
| 11 | 4,730,985 | 4,730,985 | SNP | C/T | rs4619142 (DbSNP) | |
| 11 | 4,730,942 | 4,730,942 | SNP | G/T | rs11033474 (DbSNP) | |
| 11 | 4,709,712 | 4,709,712 | SNP | G/T | 1000GP (CEU) | |
| 11 | 4,709,755 | 4,709,755 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 11 | 4,709,950 | 4,709,950 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 4,710,238 | 4,710,238 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 4,710,353 | 4,710,353 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 11 | 4,709,811 | 4,709,811 | SNP | C/A | 1000GP (CHBJPT) | |
| 11 | 4,710,241 | 4,710,241 | SNP | C/T | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | C/A | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 4,730,699 | 4,733,740 | CopyNumber | #54 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.