OR51G2 Olfactory Receptor
| Gene Symbol | OR51G21 (View this gene in GeneCards) |
| Family | 51 |
| Subfamily | G |
| Pseudogene | No |
| CORP pseudogene probability score | 0.04 (functional) |
| Aliases | OR11-28, HsOR11.3.34, ORL3390 |
| External Ids | HGNC: 15198 GeneBank: AB065794, AY284517-AY284548, BK004285, NM_001005238 ORDB: ORL3390 |
| Build #39 labels | OR51G2 |
| Chromosomal location | 11:4,914,722-4,915,663 (-) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR51E2 | 56.39% | 305 |
| OR51G1 | 63.82% | 304 |
| OR51L1 | 59.34% | 305 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR51G1 | 66% | 304 |
| Mouse | Or51g2 | 91% | 313 |
| Rat | Or51g2 | 91% | 313 |
| Cow | OR51G2B | 89% | 301 |
| Orang | OR51L1 | 57% | 305 |
| Horse | OR51G4 | 61% | 303 |
| Chimp | OR51G2P | 90% | 308 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | EG357696 |
| mRNA | BC136831 |
| GNF Atlas2 | gnf1h11097_at |
Sequence information
| Nucleotide sequence |
ATGACCCTGGGATCCCTGGGAAACAGCAGCAGCAGCGTTTCTGCTACCTTCCTGCTGAGT GGCATCCCTGGGCTGGAGCGCATGCACATCTGGATCTCCATCCCACTGTGCTTCATGTAT CTGGTTTCCATCCCGGGCAACTGCACAATTCTTTTTATCATTAAAACAGAGCGCTCACTT CATGAACCTATGTATCTCTTCCTGTCCATGCTGGCTCTGATTGACCTGGGTCTCTCCCTT TGCACTCTCCCTACAGTCCTGGGCATCTTTTGGGTTGGAGCACGAGAAATTAGCCATGAT GCCTGCTTTGCTCAGCTCTTTTTCATTCACTGCTTCTCCTTCCTCGAGTCCTCTGTGCTA CTGTCTATGGCCTTTGACCGCTTTGTGGCTATCTGCCACCCCTTGCACTATGTTTCCATT CTCACCAACACAGTCATTGGCAGGATTGGCCTGGTCTCTCTGGGTCGTAGTGTAGCACTC ATTTTTCCATTACCTTTTATGCTCAAAAGATTCCCCTATTGTGGCTCCCCAGTTCTCTCA CATTCTTATTGTCTCCACCAAGAAGTGATGAAATTGGCCTGTGCCGACATGAAGGCCAAC AGCATCTACGGCATGTTTGTCATCGTCTCTACAGTGGGTATAGACTCACTGCTCATCCTC TTCTCTTATGCTCTGATCCTGCGCACCGTGCTGTCCATCGCCTCCAGGGCTGAGAGATTC AAGGCCCTTAACACCTGTGTTTCCCACATCTGTGCTGTGCTGCTCTTCTACACTCCCATG ATTGGCCTCTCTGTCATCCATCGCTTTGGAAAGCAGGCACCCCACCTGGTCCAGGTGGTC ATGGGTTTCATGTATCTTCTCTTTCCTCCTGTGATGAATCCCATTGTCTACAGTGTGAAG ACCAAACAGATCCGGGATCGAGTGACGCATGCCTTTTGTTAC |
| Conceptual translation |
MTLGSLGNSSSSVSATFLLSGIPGLERMHIWISIPLCFMYLVSIPGNCTILFIIKTERSL HEPMYLFLSMLALIDLGLSLCTLPTVLGIFWVGAREISHDACFAQLFFIHCFSFLESSVL LSMAFDRFVAICHPLHYVSILTNTVIGRIGLVSLGRSVALIFPLPFMLKRFPYCGSPVLS HSYCLHQEVMKLACADMKANSIYGMFVIVSTVGIDSLLILFSYALILRTVLSIASRAERF KALNTCVSHICAVLLFYTPMIGLSVIHRFGKQAPHLVQVVMGFMYLLFPPVMNPIVYSVK TKQIRDRVTHAFCY Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | NS | G/A | P/S | 1000GP (YRI, YRI, YRI) |
| 11 | 4,915,378 | 4,915,378 | NS | C/G | E/Q | 1000GP (CEU) |
| 11 | 4,915,383 | 4,915,383 | NS | G/T | A/E | 1000GP (CEU, CHBJPT) |
| 11 | 4,936,401 | 4,936,401 | NS | G/A | P/S | rs61747513 (DbSNP) |
| 11 | 4,936,412 | 4,936,412 | Del(1) | -/A | rs35090253 (DbSNP) | |
| 11 | 4,936,608 | 4,936,608 | NS | C/G | E/Q | rs12419598 (DbSNP) |
| 11 | 4,936,613 | 4,936,613 | NS | G/T | A/E | rs16907312 (DbSNP) |
| 11 | 4,936,721 | 4,936,721 | NS | C/T | R/H | rs60718970 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 165 (Hasin) | |||
| 11 | 4,907,893 | 5,135,331 | CopyNumber | Variation_3835 (DGV) |
| 11 | 4,933,952 | 4,936,993 | CopyNumber | #121 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
| I266N | G204S | P165S | E96Q | A94E | M64T | R58H | I53V | % Freq | CORP | |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | I | G | P | E | A | M | R | I | 72.58 | 0.038 |
| 2 | I | G | P | E | E | M | R | I | 14.98 | 0.038 |
| 3 | I | G | P | Q | A | M | R | I | 6.07 | 0.038 |
| 4 | I | G | S | E | A | M | R | I | 3.69 | 0.038 |
| 5 | I | G | P | E | A | M | H | I | 1.46 | 0.038 |
| 6 | N | G | P | E | A | M | R | I | 0.38 | 0.038 |
| 7 | I | S | P | E | A | M | R | I | 0.38 | 0.038 |
| 8 | I | G | S | E | A | M | R | V | 0.23 | 0.038 |
| 9 | I | G | P | E | A | T | R | I | 0.15 | 0.249 |
| 10 | I | G | S | E | E | M | R | I | 0.08 | 0.038 |
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR51G2.aApr07-unspliced | main_exon | 3UTR | chr11 | 4,914,661 | 4,914,722 | - |
| CDS | chr11 | 4,914,722 | 4,915,663 | - | ||