OR51R1P Olfactory Receptor
| Gene Symbol | OR51R1P1 (View this gene in GeneCards) |
| Family | 51 |
| Subfamily | R |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-6, HsOR11.3.4P, ORL3442 |
| External Ids | HGNC: 15203 GeneBank: BK004736, NG_004318 ORDB: ORL3442 |
| Build #39 labels | OR51R1P |
| Chromosomal location | 11:4,418,060-4,419,008 (+) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR51F5P | 49.68% | 316 |
| OR51G2 | 50.65% | 306 |
| OR51H1P | 45.86% | 314 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR51R1 | 83% | 315 |
| Mouse | Or51r1 | 84% | 312 |
| Rat | Or51r1 | 83% | 313 |
| Cow | OR51R1 | 83% | 315 |
| Orang | OR51R1BP | 85% | 314 |
| Horse | OR51AA7 | 53% | 312 |
| Chimp | OR51L1 | 48% | 313 |
Sequence information
| Nucleotide sequence |
ATGTTCTCCTGCAACACCAGCACTTCTGGTCAGTCTACCTTCCTCCTCACTGGTTTTCCA GGCCTGGAAGCCTCTCATCATTGGGTTTCCATCCCCATCAACCTCTTCTGTGTGGTTTCC ATCCTGGGTAATAATATCATCCTCTTCCTGATCCACACAGATCCAGCCTTACATGAACCC ATGTATATCTTCCTGTCCATGTTGGCAGCCTCTGATCTGGGCCTCTGTGCCTCTACCTTC CCCACTATGGTGCGTCTCTTCTGGCTGGGAGCTCGTGAGCTGCCCTTTGATCTCTGTGCA GCACAGATGTTCTTCATCCATACCTTCACCTATGTGGAGTCCGGTGTACTGCTGGCCATG GCCTTCGATCGCTTTATTGCCATCCGGGACCCTCTGCATTATGCCATAATCATTACCTGC TCAGTCACAGCCGAGGTGGGAACTGCCATTCTGGTGAGGGCTGTTCTGCTCAACCTCCCG GGACCTATCCTCCTGCAGCAGCTGCTCTTTCCCAAGATCAGCGCTCTCTGTCACTGCTAC TGCCTGCACTGTGACCTTGTGGGGTTGGCCTGCTCAGACACCCAGATCAATAGCCTGGTT GGCCTGGTTTCCATCCTCTTCTCACTGTGCCTTGACTCCTTCCTCATCATGCTTTCATAT GCCCTGATCCTATGAACTGTGCTGGGCATTGCATCACCTGGGGAGCGGCTCAAGGCACTC AACACGTGTGTCTCACACCTCTGCATTGTTCTCATCTTTTATTTGCCCAAACGGGCTGTC TGTCTTGCACCGAGTAAAGAAGCATGACTACCCTGCTCTGGCAGTGCTCATGGCCAACCT ACACTTCTTGGTCCCACCCTTCATGAACCCCATTGTGTATTGCATCAAGTCTAGGCAGAT CCGTCAGAGCCTCCTAAAGCACTTCCAGCAGAAGAGGATTGATGCTTTC |
| Conceptual translation |
MFSCNTSTSGQSTFLLTGFPGLEASHHWVSIPINLFCVVSILGNNIILFLIHTDPALHEP MYIFLSMLAASDLGLCASTFPTMVRLFWLGARELPFDLCAAQMFFIHTFTYVESGVLLAM AFDRFIAIRDPLHYAIIITCSVTAEVGTAILVRAVLLNLPGPILLQQLLFPKISALCHCY CLHCDLVGLACSDTQINSLVGLVSILFSLCLDSFLIMLSYALILXVLGIASPGERLKAL NTCVSHLCIVLIFYLPKRAVCLAPSKEAXHPALAVLMANLHFLVPPFMNPIVYCIKSRQ IRQSLLKHFQQKRIDAF Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 4,439,647 | 4,439,647 | SNP | A/C | rs1451660 (DbSNP) | |
| 11 | 4,439,660 | 4,439,660 | SNP | A/G | rs74052109 (DbSNP) | |
| 11 | 4,439,961 | 4,439,961 | SNP | A/G | rs72845389 (DbSNP) | |
| 11 | 4,439,722 | 4,439,722 | SNP | A/G | rs1451661 (DbSNP) | |
| 11 | 4,439,653 | 4,439,653 | SNP | A/T | rs2952736 (DbSNP) | |
| 11 | 4,439,535 | 4,439,535 | SNP | C/T | rs1451659 (DbSNP) | |
| 11 | 4,439,652 | 4,439,652 | SNP | T/C | rs2981551 (DbSNP) | |
| 11 | 4,418,305 | 4,418,305 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 11 | 4,418,417 | 4,418,417 | SNP | A/C | 1000GP (CEU, CHBJPT) | |
| 11 | 4,418,492 | 4,418,492 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 4,418,731 | 4,418,731 | SNP | A/G | 1000GP (CEU) | |
| 11 | 4,418,739 | 4,418,739 | SNP | T/G | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | G/T | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 4,333,543 | 4,474,341 | CopyNumber | Variation_2164 (DGV) |
| 11 | 4,055,945 | 4,510,188 | CopyNumber | Variation_3834 (DGV) |
| 11 | 4,439,190 | 4,442,238 | CopyNumber | #145 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.