OR5AK4P Olfactory Receptor
| Gene Symbol | OR5AK4P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | AK |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | PJCG3, OR11-221, OR11-222, HsOR11.11.98P, ORL3632 |
| External Ids | HGNC: 15253 GeneBank: AF309700, AF309701, AY284037-AY284068, BK004784, BK004805, NG_002337 ORDB: ORL3632 |
| Build #39 labels | OR5AK4P |
| Chromosomal location | 11:57,037,534-57,038,458 (+) |
| Cluster | 11@57 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5AK1P | 64.08% | 309 |
| OR5AK2 | 62.78% | 309 |
| OR5AK3P | 62.34% | 308 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR5AK8 | 79% | 309 |
| Mouse | Or5ak4 | 80% | 307 |
| Rat | Or5ak4 | 80% | 308 |
| Cow | OR5AK6 | 78% | 309 |
| Orang | OR5AK3P | 65% | 308 |
| Horse | OR5AK33 | 78% | 309 |
| Chimp | OR5AK1P | 64% | 309 |
Expression evidences
| Source | Accession |
|---|---|
| mRNA | AF309700 |
Sequence information
| Nucleotide sequence |
ATGGAACAAAATAATGGCACTGAAGTGACTGAATTCATTCTCCTGGGATTTGCTGGTCAA CACAAGTCTTGGCATATCCTCTCCATAGCATTTCTAGCAATCTATGTGGTTACCCCAGTA GGTAATATTGGAATGATCCTACTTATCAAAATTGATGCTTCTCTTCATATCCCCATGTAA ATTTTCCTCCAACACTTGGCATTTGTTGATCTCTGTTACACCTCTGCTATCACTCCCAAG ATGTTGAAAAACTTTGTAGAAACAAAAAAATCTATCTCATGTATAGGATGTATGGTGCAA TTACTAGTTTATGGTACTTTGCAACAAGTGACTGCTACATCCTGGCTGCTATGGCAGTAG ACCGTTATGTGGCCTTCTGTAACCCACTCCATTATCCAGGGGTTATGTCCCAGAGACTCT GCATTAAGCTATTAGTTAGTTCATATGTCATGGGTTTCCTAAATGCCTCTATAAACATAA GTTTCACTTTCTCATTGAACTTCTGCAAATCCAAAACAATTAATCACTTTTTCTGTGATG AACCTCCAATTATTGCCCTACCATGCTCCAATATTGACCTCAACATCATGTTATTAACAG TATTTGTGGGATTAAATTTGATGTGCACTGTGATGGTGGTCATCATTTCCTGCATATATG TCCTGGTTGCCATCCTGAGGATATCTTCTGCTGCAGGGAAGAAAAAAGTCTCTCTACATG TGCCTCCCACCTGACAGCAGTCACCATTTTCTATGGGGTTCTCTCTTACATGTATCTATG CCATCGTATTAATGAGTCTCAAAAACAAGAAAAAGTGGCCTCTGTGTTTTATGGCATTAT TATTCCCATGTTAAACCCCTTGATTTACAGCCAGAGAAACCAAGATGTGATTGAAGCCAT AAAACTAACAGAAAAAAAGTATTTC |
| Conceptual translation |
MEQNNGTEVTEFILLGFAGQHKSWHILSIAFLAIYVVTPVGNIGMILLIKIDASLHIPMXbr/>IFLQHLAFVDLCYTSAITPKMLKNFVETKKSISCIGCMVQLLVYG/FATSDCYILAAMA VDRYVAFCNPLHYPGVMSQRLCIKLLVSSYVMGFLNASINISFTFSLNFCKSKTINHFFC DEPPIIALPCSNIDLNIMLLTVFVGLNLMCTVMVVIISCIYVLVAILRISSAAGKKKV/ STCASHLTAVTIFYGVLSYMYLCHRINESQKQEKVASVFYGIIIPMLNPLIYSQRNQDVI EAIKLTEKKYF Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 56,805,102 | 56,805,101 | Ins(1) | -/G | rs35930052 (DbSNP) | |
| 11 | 56,805,652 | 56,805,652 | SNP | A/C | rs72472124 (DbSNP) | |
| 11 | 56,805,235 | 56,805,235 | SNP | C/G | rs71482300 (DbSNP) | |
| 11 | 56,805,626 | 56,805,626 | SNP | C/T | rs17151502 (DbSNP) | |
| 11 | 56,805,122 | 56,805,122 | SNP | C/T | rs11228882 (DbSNP) | |
| 11 | 57,037,647 | 57,037,647 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 11 | 57,037,736 | 57,037,736 | SNP | T/C | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR5AK4P.aApr07-unspliced | main_exon | CDS_partial | chr11 | 57,037,884 | 57,038,400 | + |