OR5AO1P Olfactory Receptor
| Gene Symbol | OR5AO1P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | AO |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | |
| External Ids | HGNC: 31285 GeneBank: NG_004427 |
| Build #39 labels | |
| Chromosomal location | 11:57,045,079-57,045,409 (+) |
| Cluster | 11@57 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5AK1P | 52.27% | 88 |
| OR5AK2 | 53.41% | 88 |
| OR5AK3P | 54.02% | 87 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Sequence information
| Nucleotide sequence |
ACACCACTGTGATTGATGGTGGTCATCTTTTCCCAGGTATATACCCTGGCTGCTATCCCG AAGATGTCTTCCACTGCAGGAAGGACACAAGGCTTCTTCATGTGAGCTTCCCACCTGACG AGCAGTTGTCATTTTCTATGGCACTCCCTCTTACATGTATCTACACCATGGGAACAACGG GTCTCCAAAGCAGGGGAAAGTGTCATCTGTGTTCTATGGCATTGTGATTGATCTGCAGCC TGAGAGTCCAAGATGCGAGAGAAGCTCTAAAAGAAAAAGGAAAGAAGCAGTTCTAGATTG GGCCTCAGTTTCTAATTCTCTGCACTTGTAG |
| Conceptual translation |
TPLXVVIFSQVYTLAAIPKMSSTAGRTQGFFMXSHLT\VVIFYGTPSYMYLHHGNNG SPKQGKVSSVFYGIVIDLQPE/SKMREKLXKKERSSSRLGLSFXSALV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 56,812,739 | 56,812,739 | SNP | A/C | rs4550239 (DbSNP) | |
| 11 | 56,812,605 | 56,812,605 | SNP | G/T | rs35195541 (DbSNP) | |
| 11 | 57,045,130 | 57,045,130 | SNP | G/T | 1000GP (CEU) | |
| 11 | 57,045,137 | 57,045,137 | SNP | C/T | 1000GP (CEU) | |
| 11 | 57,045,264 | 57,045,264 | SNP | C/A | 1000GP (CEU) | |
| 11 | 100 | -100 | SNP | C/T | 1000GP (YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.