OR5BQ1P Olfactory Receptor
| Gene Symbol | OR5BQ1P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | BQ |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | ORL3571 |
| External Ids | HGNC: 15278 GeneBank: NG_004197 ORDB: ORL3571 |
| Build #39 labels | OR5BQ2P, OR5BQ1P |
| Chromosomal location | 11:57,029,387-57,029,722 (+) |
| Cluster | 11@57 |
| Synteny | CLIC#26 |
| Remarks | Disrupted by Line repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5AK1P | 45.45% | 110 |
| OR5AK2 | 45.87% | 109 |
| OR5AK3P | 44.04% | 109 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR5AK8 | 45% | 109 |
| Mouse | Or5ak23 | 46% | 111 |
| Rat | Or5ak4 | 44% | 110 |
| Cow | OR5AK6 | 41% | 119 |
| Orang | OR5AK3P | 46% | 109 |
| Horse | OR5AK35 | 47% | 110 |
| Chimp | OR5AK2 | 45% | 109 |
Sequence information
| Nucleotide sequence |
TACATGTAGTAAAAATAGTTGCTAATCTATGCTGGAGTTTACTTGAATGTCACTATGCTG ATCGTCACCTTCAAGTACACACATATCTTCCATCATCCTGAGCTTGCCCTCTGCTATGTG TCTTTTTCCGCAGTTGTCTTCCACCTGACAGCTGTCACCATTTTCTTTGGAGCTCTCTCT TACATGGACTTACAACCTGAATCTACTGTGTTTCAAGAGCAAGAAAATCCAGCATCCATA TTTTGTGGCATTATGACTCTCGTGTTAAACTTCCTTATCTACTGCCTGTGAAATTAGGAA GTAAAAGAAGCTCTACAGTTAACAAGGAAAAAGTAT |
| Conceptual translation |
YMXKXLIYAGVYLNVTMLIVTFKYTHIFHHPELALCYVSFSAVVFHLTAVTIFFGALS YMDLQPESTVFQEQENPASIFCGIMTLVLNFLIYCLXXVKEALQLTRKKY Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 56,797,089 | 56,797,089 | SNP | G/T | rs602991 (DbSNP) | |
| 11 | 57,029,614 | 57,029,614 | SNP | T/G | 1000GP (CEU, CHBJPT) | |
| 11 | 100 | -100 | SNP | T/G | 1000GP (YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.