OR5M5P Olfactory Receptor
| Gene Symbol | OR5M5P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | M |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-198, OR11-192, OR11-187, HsOR11.11.75P, ORL3507 |
| External Ids | HGNC: 14810 GeneBank: AB065743, AF399360, BK004644, BK004652, BK004721, NG_004151 ORDB: ORL3507 |
| Build #39 labels | OR5M5P |
| Chromosomal location | 11:56,526,567-56,527,502 (-) |
| Cluster | 11@56 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5M10 | 67.32% | 306 |
| OR5M11 | 66.67% | 306 |
| OR5M2P | 66.03% | 312 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR5M5 | 91% | 312 |
| Mouse | Or5m5 | 90% | 312 |
| Rat | Or5m5 | 89% | 312 |
| Cow | OR5M5 | 88% | 312 |
| Orang | OR5G1 | 53% | 312 |
| Horse | OR5M5 | 88% | 312 |
| Chimp | OR5M10 | 66% | 312 |
Sequence information
| Nucleotide sequence |
ATGGTTAGAGGAAATTCTACTTTGGTGACGGAATTTATTCTCTTGGGATTAAAGGATCTT CCAGAGCTTCAGCCCATCCTCTTTGTACTGTTCCTGCTAATCTACCTGATCACTGTCGGG GGGAACCTTGGGATGTTGGTGTTGATCAGGATAGATTCACGCCTCCACACCCCCATGTAT TTCTTTCTTGCTAGTTTGTCCTGCTTGGATTTGTATTACTCCACTAATGTGACTCCCAAG ATGTTGGTGAACTTCTTCTCAGACAAGAAAGCCATTTCCTATGCTGCTTGTTTAGTCCAG TGCTATTTTTTCATTGCTGTGGTGATTACTGAATATTATATGCTAGCTGTAATGGCCTAT GATAGGTATGTGGCCATCTGTAACCCTTTGCTTTACAGCAGCAAGATGTCCAAAGGGCTC TGTATTCGCCTGATTGCTGGTCCATATGTCTATGGGTTTCTTAGTGGACTGATGGAAACC ATGTGGACATACCACTTGACCTTCTGTGGCTCCAATATCATTAATCACTTCTACTGTGCT GACCCACCCCTCATCCGACTTTCCTGCTCTGACACTTTCATTAAGGAAACATCCATGTTT GTGGTAGCATGATTTAACCTCTCCAGCTCCCTCATCATAACCCTCATCTCCTACATCTTC ATTCTCATTGCCATCCTGAGGATGCGTTCTGCTGAAAGTAGGCACAAAGCGTTCTCCACC TGCGGGTCCCACCTGGTGGCAGTGACTGTGTTTTATGGAACCCTGTTCTGCATGTACGTT AGACCTCCCACGGACAGGTCAGTGGAACAGTCCAAAGTCATTGCTGTTTTCTACACTTTT GTAAGCCCTATGTTGAACCCCATCATCTATAGTTTGAGGAACAAGGATGTGAAACAAGCT TTTTGGAAACTGATCAGAAGAAACGTGCTTTTGAAG |
| Conceptual translation |
MVRGNSTLVTEFILLGLKDLPELQPILFVLFLLIYLITVGGNLGMLVLIRIDSRLHTPMY FFLASLSCLDLYYSTNVTPKMLVNFFSDKKAISYAACLVQCYFFIAVVITEYYMLAVMAY DRYVAICNPLLYSSKMSKGLCIRLIAGPYVYGFLSGLMETMWTYHLTFCGSNIINHFYCA DPPLIRLSCSDTFIKETSMFVVAXNLSSSLIITLISYIFILIAILRMRSAESRHKAFST CGSHLVAVTVFYGTLFCMYVRPPTDRSVEQSKVIAVFYTFVSPMLNPIIYSLRNKDVKQA FWKLIRRNVLLK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 56,294,153 | 56,294,152 | Ins(1) | -/C | rs34275135 (DbSNP) | |
| 11 | 56,294,338 | 56,294,338 | SNP | A/G | rs646472 (DbSNP) | |
| 11 | 56,294,275 | 56,294,275 | SNP | C/T | rs658845 (DbSNP) | |
| 11 | 56,294,818 | 56,294,818 | SNP | C/T | rs637912 (DbSNP) | |
| 11 | 56,294,431 | 56,294,431 | SNP | G/T | rs1945196 (DbSNP) | |
| 11 | 56,526,799 | 56,526,799 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 11 | 56,526,862 | 56,526,862 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 56,526,955 | 56,526,955 | SNP | G/T | 1000GP (CEU, CHBJPT) | |
| 11 | 56,527,342 | 56,527,342 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 11 | 100 | -100 | SNP | G/C | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 129 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.