OR7A8P Olfactory Receptor
| Gene Symbol | OR7A8P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | A |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR19-11, OST042, hg83, HsOR19.3.4P, ORL3793 |
| External Ids | HGNC: 8371 GeneBank: AF399434, AY284197-AY284228, NG_003166 ORDB: ORL3793 |
| Build #39 labels | OR7A8P |
| Chromosomal location | 19:14,852,035-14,852,944 (-) |
| Cluster | 19@15a |
| Synteny | CLIC#45 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7A10 | 81.23% | 309 |
| OR7A17 | 80.91% | 309 |
| OR7A2P | 76.38% | 309 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7A51 | 77% | 303 |
| Mouse | Or7a36 | 72% | 308 |
| Rat | Or7a41 | 73% | 303 |
| Cow | OR7A65 | 77% | 307 |
| Orang | OR7A10C | 83% | 309 |
| Orang | OR7A10 | 81% | 309 |
| Orang | OR7A3 | 80% | 309 |
| Horse | OR7A96 | 76% | 308 |
| Chimp | OR7A10 | 80% | 309 |
Sequence information
| Nucleotide sequence |
ATGAAACCAGGGAATGATACACGAATTTCAGAATTTCTTCTTCTAGGACTTTCAGCAGAA CCAGAATTGCAGCCCTTCTTCTTTGGGCTGTTCCTGTCCATGTACCTGGTCACCGTGCTC GGGAACCTGCTCATCATCCTGGCCACAATCTCAGACTCCCACCTCCACACCCCCATGTAC TTCTTCCTCTCCAACCTGTCCTTTGCAGATATCAGTTTTGTGTCTACCACTGTCCCGAAG ATGCTGGTGAATATCCAGACGCAGAGCAGAGTCATCACCTATGCAGGCTGCATCACCCAG ATGTGCTTTTTCCTACTATTTGCAGTGTTGGACAGCCTTCTCCTAGCTGTGATGGCCTAT GATCGGTTTGTGGCCATCTGTCATCCTCTGTACTACACAATCATCATGAACCCTCAGTTC TATAGACTGGATTCTTAGTGTCCTGAATTCTCTGTTACAAAGCTTAATGGTGTTGCCACT GCCCTTCTATACAGACATAGCAATCCCCCACTTTTTCTGTGAACTTAATCAGATAATCTG CATTGCCTGTTCTGACACCTTTCTTAATGACATCATGATATATTGTGCAACTGTGCTGCT GGGCGGTGGTCCCCTCACTGGAATCCTTTACTCTTACTCTAAGATAGTTTCCTCCATACG TGCAATCTCATCAGCTCAGGGGAAGTACAAGGCATTTTCCACCTGTGCATCTCACCTCTC AGTTGTCTCCTTGTTTTATGGTACAAGCCTAGGAATGTACCTTAGTTCTGCTGCAACCCA CAACTCACCCTCAAGTGCAACAGCCTCAGTGATGTACACTGTGGTCACCCCCATGCTGAA CCCCTTTATCTACAGTCTGAGGAATAAAGACCTAAAGGATGCTCTGAAACGCTTCTTCAG AAGGAAGCAA |
| Conceptual translation |
MKPGNDTRISEFLLLGLSAEPELQPFFFGLFLSMYLVTVLGNLLIILATISDSHLHTPMY FFLSNLSFADISFVSTTVPKMLVNIQTQSRVITYAGCITQMCFFLLFAVLDSLLLAVMAY DRFVAICHPLYYTIIMNPQFY\WILSVLNSLLQSLMVLPLPFYTDIAIPHFFCELNQII CIACSDTFLNDIMIYCATVLLGGGPLTGILYSYSKIVSSIRAISSAQGKYKAFSTCASHL SVVSLFYGTSLGMYLSSAATHNSPSSATASVMYTVVTPMLNPFIYSLRNKDLKDALKRFF RRKQ Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 19 | 100 | -100 | SNP | G/T | 1000GP (YRI, YRI, YRI, YRI) | |
| 19 | 14,852,156 | 14,852,156 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 19 | 14,852,165 | 14,852,165 | SNP | T/C | 1000GP (CEU) | |
| 19 | 14,852,581 | 14,852,581 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 19 | 14,852,920 | 14,852,920 | SNP | T/C | 1000GP (CEU) | |
| 19 | 14,962,948 | 14,962,948 | SNP | C/T | rs73506493 (DbSNP) | |
| 19 | 14,962,968 | 14,962,968 | SNP | G/T | rs73010182 (DbSNP) | |
| 19 | 14,963,098 | 14,963,098 | SNP | A/G | rs8104887 (DbSNP) | |
| 19 | 14,963,152 | 14,963,152 | SNP | C/T | rs67130136 (DbSNP) | |
| 19 | 14,963,330 | 14,963,330 | SNP | A/G | rs28708513 (DbSNP) | |
| 19 | 14,963,393 | 14,963,393 | SNP | A/G | rs4808562 (DbSNP) | |
| 19 | 14,963,637 | 14,963,637 | SNP | A/G | rs34002624 (DbSNP) | |
| 19 | 14,963,732 | 14,963,732 | SNP | C/T | rs73010185 (DbSNP) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.