OR7E102P Olfactory Receptor
| Gene Symbol | OR7E102P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | 0.04 (functional) |
| Aliases | HsOR2.2.1P |
| External Ids | HGNC: 15043 GeneBank: NG_004385 |
| Build #39 labels | OR7E102 |
| Chromosomal location | 2:95,546,578-95,547,573 (+) |
| Cluster | 2@96 |
| Synteny | CLIC#0 |
| Remarks | Full ORF without a suitable ATG |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E100P | 90.03% | 331 |
| OR7E111P | 90.03% | 331 |
| OR7E62P | 88.22% | 331 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 71% | 312 |
| Mouse | Or7e178 | 68% | 308 |
| Rat | Or7e173 | 65% | 308 |
| Cow | OR7E186 | 70% | 305 |
| Orang | OR7E100P | 90% | 312 |
| Orang | OR7E111P | 91% | 297 |
| Orang | OR7E111BP | 91% | 297 |
| Orang | OR7E102 | 90% | 296 |
| Horse | OR7E221 | 71% | 306 |
| Chimp | OR7E111P | 92% | 297 |
| Chimp | OR7E62P | 91% | 297 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | DA082309 |
Sequence information
| Nucleotide sequence |
CCAAGACACACAGAGCCATGGAATCTCACAGGTATCTCAGAATTCCTCCTCCTGGGACTC TCAGAGGATCCAGAACTGCAGCCCGTCCTCCCTGGGCTGTCCCTGTCCATGTACCTGGTC ACGGTGCTGAGGAACCTGCTCATCATCCTGGCTGTCAGCTCTGACTCCCACCTCCACACC CCCATGTGCTTCTTCCTCTCCAACCTGTGCTGGGCTGACATCGGTTTCACCTCGGCCATG GTTCCCAAGATGATTGTGGACATGCAGTCGCATAGCAGAGTCATCTCTTATGCGGGCTGC CTGACACAGATGTCTTTCTTTGTCCTTTTTGCATGTATAGAAGACATGCTCCTGACAGTG ATGGCCTATGACCGATTTGTGGCCATCTGTCACCCCCTGCACTACCCAGTCATCATGAAT CCTCACCTTGGTGTCTTCTTAGTTTTGGTGTCCTTTTTCCTCAGCCTGTTGGATTCCCAG CTGCACAGTTGGATTGTGTTACAATTCACCTTCTTCAAGAATGTGGAAATCTCCAATTTT GTCTGTGACCCATCTCAACTTCTCAACCTTGCCTGTTCTGACAGTGTCATCAATAGCATA TTCATATATTTAGATAGTATTATGTTTGGTTTTCTTCCCATTTCAGGGATCCTTTTGTCT TACGCTAACAATGTCCCCTCCATTCTAAGAATTTCATCATCAGATAGGAAGTCTAAAGCC TTCTCCACCTGTGGCTCTCACCTGGCAGTTGTTTGCTTATTTTATGGAACAGGCATTGGC GTGTACCTGACTTCAGCTGTGTCACCACCCCCCAGGAATGGTGTGGTGGCATCAGTGATG TACGCTGTGGTCACCCCCATGCTGAACCCTTTCATCTACAGCCTGAGAAATAGGGACATT CAAAGTGCCCTGTGGAGGCTGCGCAGCAGAACAGTCGAATCTCATGATCTGTTATCTCAA GATCTGCTCCATCCTTTTTCTTGTGTGGGTGAGAAA |
| Conceptual translation |
PRHTEPWNLTGISEFLLLGLSEDPELQPVLPGLSLSMYLVTVLRNLLIILAVSSDSHLHT PMCFFLSNLCWADIGFTSAMVPKMIVDMQSHSRVISYAGCLTQMSFFVLFACIEDMLLTV MAYDRFVAICHPLHYPVIMNPHLGVFLVLVSFFLSLLDSQLHSWIVLQFTFFKNVEISNF VCDPSQLLNLACSDSVINSIFIYLDSIMFGFLPISGILLSYANNVPSILRISSSDRKSKA FSTCGSHLAVVCLFYGTGIGVYLTSAVSPPPRNGVVASVMYAVVTPMLNPFIYSLRNRDI QSALWRLRSRTVESHDLLSQDLLHPFSCVGEK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 2 | 96,213,304 | 96,213,304 | Del(1) | -/T | rs35036521 (DbSNP) | |
| 2 | 96,212,699 | 96,212,699 | SNP | G/A | rs36087694 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 2 | 96,098,187 | 96,351,963 | Inversion | Variation_0528 (DGV) |
| 2 | 96,142,132 | 96,312,233 | CopyNumber | Variation_4299 (DGV) |
| 2 | 96,161,047 | 96,249,562 | Inversion | Variation_29476 (DGV) |
| CopyNumber | 65 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E102P.aApr07 | exon_5UTR | chr2 | 95,526,857 | 95,527,260 | + | |
| main_exon | 5UTR | chr2 | 95,546,574 | 95,546,578 | + | |
| CDS_partial | chr2 | 95,546,578 | 95,546,750 | + | ||
| OR7E102P.cApr07 | exon_5UTR | chr2 | 95,526,873 | 95,527,219 | + | |
| main_exon | 5UTR | chr2 | 95,546,574 | 95,546,578 | + | |
| CDS_partial | chr2 | 95,546,578 | 95,546,723 | + | ||